Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05019 and H281DRAFT_05020 are separated by 168 nucleotidesH281DRAFT_05020 and H281DRAFT_05021 are separated by 163 nucleotidesH281DRAFT_05021 and H281DRAFT_05022 are separated by 180 nucleotidesH281DRAFT_05022 and H281DRAFT_05023 are separated by 116 nucleotides H281DRAFT_05019: H281DRAFT_05019 - hypothetical protein, at 203,122 to 204,849 _05019 H281DRAFT_05020: H281DRAFT_05020 - Signal transduction histidine kinase, at 205,018 to 206,103 _05020 H281DRAFT_05021: H281DRAFT_05021 - Response regulator, at 206,267 to 206,644 _05021 H281DRAFT_05022: H281DRAFT_05022 - two component transcriptional regulator, LuxR family, at 206,825 to 207,511 _05022 H281DRAFT_05023: H281DRAFT_05023 - Predicted ATPase, at 207,628 to 212,706 _05023
Group Condition H281DRAFT_05019 H281DRAFT_05020 H281DRAFT_05021 H281DRAFT_05022 H281DRAFT_05023
carbon source acetate (C) +0.0 N.D. +0.1 -2.4 -0.4
carbon source Hydroxy-L-Proline (C) -0.2 N.D. -1.4 -0.6 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.3 N.D. -1.0 -0.6 -0.4
carbon source D-Glucose (C) +0.2 N.D. -1.3 -1.1 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 N.D. -1.1 -1.1 -0.0
carbon source Dodecandioic (C) +0.2 N.D. -2.4 +0.2 +0.1
phage Bu1_100 -0.1 N.D. -1.4 -0.2 -0.2
carbon source Protocatechuic Acid (C) -0.4 N.D. +0.2 -0.8 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. -1.3 +0.4 -0.1
carbon source Valeric (C) -0.4 N.D. -0.1 -0.8 +0.3
carbon source butyrate (C) -0.2 N.D. +0.3 -0.9 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. +0.7 -1.3 -0.1
carbon source Protocatechuic Acid (C) -0.3 N.D. +0.6 -0.8 -0.3
carbon source Gallic Acid (C) -0.2 N.D. +0.5 -1.1 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.3 -1.3 +0.4
carbon source Protocatechuic Acid (C) +0.1 N.D. +1.0 -1.4 -0.0
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 N.D. -1.0 +0.6 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 N.D. -1.3 +1.0 +0.0
carbon source D-Glucose (C) -0.1 N.D. +0.8 -0.5 -0.2
carbon source Sebacic (C) -0.3 N.D. +1.7 -1.1 -0.5
carbon source Hexanoic (C) +0.4 N.D. +0.4 -0.8 -0.0
phage Bu1_10 -0.1 N.D. -0.8 +0.8 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.6 N.D. -0.8 +0.3 +0.3
carbon source adipate (C) +0.3 N.D. +1.1 -0.9 +0.0
carbon source Malonic (C) +0.2 N.D. +1.2 -0.5 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. +0.7 -0.4 +0.4
carbon source adipate (C) +0.4 N.D. +1.1 -0.4 +0.0
carbon source 3-hydroxybutyric (C) +0.3 N.D. +1.3 +0.1 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. +0.5 +1.1 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 N.D. +0.9 +0.5 +0.4
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