Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

Group	Condition	H281DRAFT_04884	H281DRAFT_04885	H281DRAFT_04886	H281DRAFT_04887	H281DRAFT_04888
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.3	-0.1	-0.7	-1.0	-0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.3	-0.2	-0.9	-0.7	+0.0
carbon source	Valeric (C)	+0.2	-0.1	-0.2	-0.9	+0.1
carbon source	Hexanoic (C)	-0.2	-0.2	+0.3	-0.1	-0.6
carbon source	Azelaic (C)	-0.3	-0.4	+0.4	-0.3	-0.2
carbon source	D-Glucose (C)	-0.4	-0.3	+0.3	-0.2	-0.1
carbon source	Protocatechuic Acid (C)	+0.1	-0.1	+0.2	-0.8	-0.2
carbon source	succinate (C)	+0.0	-0.3	+0.3	-0.7	-0.0
carbon source	propionate (C)	-0.1	+0.1	+0.2	-0.9	-0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.1	-0.6	+0.3	-0.4	+0.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.5	-0.6	+0.2	+0.1	+0.2
carbon source	Glycerol (C)	-0.3	-0.1	+0.3	-0.3	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.0	+0.2	+0.4	-0.8	+0.1
carbon source	Malonic (C)	+0.3	+0.4	+0.2	-1.2	+0.2
carbon source	Malonic (C)	+0.2	-0.2	+0.3	-0.4	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.2	-0.4	-0.1	+0.3	+0.2
carbon source	adipate (C)	+0.4	+0.5	+0.1	-0.7	+0.3
carbon source	Valeric (C)	+0.2	+0.2	+0.4	-0.4	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.3	+0.3	-0.2	+0.3	+0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.4	-0.3	+0.4	+0.8	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.1	+0.3	+0.7	+0.2
carbon source	Sebacic (C)	+0.1	+0.0	+0.8	+0.4	-0.3
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	+0.6	-0.0	-0.2	+0.4	+0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.0	-0.1	+0.4	+0.5	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.2	+0.0	+0.6	+0.2	+0.2
carbon source	4-Hydroxybenzoic Acid (C)	-0.0	+0.2	+0.7	+0.6	-0.1
carbon source	2'-Deoxyinosine 10 mM (C)	+0.5	+0.3	+0.1	+0.3	+0.1
phage	Bu1_100	-0.2	-0.0	+0.8	+0.3	+0.5
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.3	+0.2	-0.0	+0.8	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.0	+0.4	+0.2	+0.9	+0.8