Fitness for 3 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_04860 and H281DRAFT_04861 are separated by 105 nucleotidesH281DRAFT_04861 and H281DRAFT_04862 are separated by 263 nucleotides H281DRAFT_04860: H281DRAFT_04860 - glucose-1-phosphate adenylyltransferase, at 109 to 1,374 _04860 H281DRAFT_04861: H281DRAFT_04861 - starch synthase, at 1,480 to 2,940 _04861 H281DRAFT_04862: H281DRAFT_04862 - Pyridoxal kinase, at 3,204 to 4,070 _04862
Group Condition H281DRAFT_04860 H281DRAFT_04861 H281DRAFT_04862
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.5 N.D.
carbon source succinate (C) +0.1 -0.4 N.D.
carbon source Malonic (C) +0.2 -0.4 N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.3 N.D.
carbon source Malonic (C) +0.3 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.4 -0.1 N.D.
carbon source D-Glucose (C) +0.1 +0.4 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.2 +0.2 N.D.
ecofab LB in EcoFAB_3.5mL +0.2 +0.3 N.D.
carbon source D,L-Lactate (C) +0.1 +0.4 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.4 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 -0.1 N.D.
carbon source D-Glucose (C) +0.2 +0.3 N.D.
carbon source succinate (C) +0.2 +0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM +0.2 +0.4 N.D.
carbon source D,L-Lactate (C) +0.2 +0.4 N.D.
lb LB +0.2 +0.4 N.D.
carbon source acetate (C) +0.5 +0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 +0.4 N.D.
lb LB +0.4 +0.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 +0.6 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 +0.8 N.D.
remove
H281DRAFT_04860		 remove
H281DRAFT_04861
plot		 remove
H281DRAFT_04862
plot