Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04835 and H281DRAFT_04836 are separated by 43 nucleotidesH281DRAFT_04836 and H281DRAFT_04837 are separated by 14 nucleotidesH281DRAFT_04837 and H281DRAFT_04838 overlap by 14 nucleotidesH281DRAFT_04838 and H281DRAFT_04839 are separated by 2029 nucleotides H281DRAFT_04835: H281DRAFT_04835 - hypothetical protein, at 268,768 to 270,393 _04835 H281DRAFT_04836: H281DRAFT_04836 - Glycosyltransferase, at 270,437 to 271,813 _04836 H281DRAFT_04837: H281DRAFT_04837 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family, at 271,828 to 273,570 _04837 H281DRAFT_04838: H281DRAFT_04838 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family, at 273,557 to 275,284 _04838 H281DRAFT_04839: H281DRAFT_04839 - hypothetical protein, at 277,314 to 277,694 _04839
Group Condition H281DRAFT_04835 H281DRAFT_04836 H281DRAFT_04837 H281DRAFT_04838 H281DRAFT_04839
carbon source Hydroxy-L-Proline (C) -4.1 N.D. +0.3 +0.0 +0.0
carbon source Malonic (C) -4.1 N.D. +0.0 +0.1 +0.1
carbon source Malonic (C) -4.1 N.D. +0.3 +0.2 +0.1
carbon source propionate (C) -3.7 N.D. +0.1 +0.1 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -2.7 N.D. -0.1 -0.2 -0.1
carbon source D-Glucose (C) -2.9 N.D. -0.5 +0.2 +0.2
carbon source D,L-Lactate (C) -2.9 N.D. -0.1 +0.1 +0.0
carbon source Gallic Acid (C) -3.7 N.D. +0.4 +0.2 +0.1
carbon source D,L-Lactate (C) -2.5 N.D. -0.3 +0.1 +0.0
carbon source propionate (C) -2.3 N.D. -0.4 +0.2 +0.1
carbon source 3-Hydroxypropionate (C) -2.9 N.D. +0.1 +0.2 +0.2
carbon source propionate (C) -2.4 N.D. -0.3 +0.2 +0.3
carbon source D-Glucose (C) -2.7 N.D. +0.1 +0.3 +0.2
carbon source Protocatechuic Acid (C) -2.4 N.D. +0.3 +0.2 +0.0
carbon source Phenylacetic (C) -3.5 N.D. +1.4 +0.1 +0.2
carbon source D-Galactose (C) -2.7 N.D. +0.7 +0.2 +0.1
carbon source Phenylacetic (C) -3.2 N.D. +1.4 +0.3 +0.2
carbon source p-Coumaric (C) -2.7 N.D. +0.8 +0.4 +0.1
carbon source Protocatechuic Acid (C) -2.3 N.D. +0.5 +0.3 +0.2
carbon source p-Coumaric (C) -2.1 N.D. +0.7 +0.2 +0.1
carbon source Malonic (C) -2.4 N.D. +0.6 +0.3 +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.9 N.D. +1.1 +1.0 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -2.1 N.D. +2.8 +0.7 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +2.9 N.D. -0.0 +0.1 +0.0
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.4 N.D. +1.6 +1.2 -0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.3 N.D. +0.9 +0.5 +0.1
phage Bu1_100 +7.0 N.D. -2.0 -1.1 +0.3
phage Bu1_100 +7.7 N.D. -1.9 -1.0 +0.1
ecofab LB in EcoFAB_3.5mL +6.5 N.D. -1.0 -0.2 -0.0
phage Bu1_10 +8.1 N.D. -1.6 -0.8 +0.1
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