Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04819 and H281DRAFT_04820 are separated by 12 nucleotidesH281DRAFT_04820 and H281DRAFT_04821 are separated by 203 nucleotidesH281DRAFT_04821 and H281DRAFT_04822 are separated by 396 nucleotidesH281DRAFT_04822 and H281DRAFT_04823 are separated by 10 nucleotides H281DRAFT_04819: H281DRAFT_04819 - lyso-ornithine lipid acyltransferase, at 253,967 to 254,806 _04819 H281DRAFT_04820: H281DRAFT_04820 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 254,819 to 255,703 _04820 H281DRAFT_04821: H281DRAFT_04821 - Nucleoside-diphosphate-sugar epimerase, at 255,907 to 256,818 _04821 H281DRAFT_04822: H281DRAFT_04822 - dTDP-glucose 4,6-dehydratase, at 257,215 to 258,276 _04822 H281DRAFT_04823: H281DRAFT_04823 - Glucose-1-phosphate thymidylyltransferase, at 258,287 to 259,180 _04823
Group Condition H281DRAFT_04819 H281DRAFT_04820 H281DRAFT_04821 H281DRAFT_04822 H281DRAFT_04823
phage Bu1_100 -0.1 -1.1 -0.4 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 -0.3 -0.1 N.D. N.D.
carbon source D,L-Lactate (C) -0.3 -0.7 -0.1 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -0.2 +0.0 N.D. N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -0.3 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.2 -0.1 N.D. N.D.
phage Bu1_100 +0.0 -0.5 -0.3 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 +0.1 -0.6 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6 -0.1 -0.0 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -0.1 +0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 +0.1 -0.2 N.D. N.D.
carbon source acetate (C) +0.2 -0.3 -0.2 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 -0.4 -0.1 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.3 +0.6 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 +0.4 +0.1 N.D. N.D.
carbon source Glycerol (C) -0.0 +0.4 -0.3 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 -0.3 +0.2 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 +0.0 +0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 +0.7 -0.1 N.D. N.D.
phage Bu1_10 +0.3 +0.5 -0.3 N.D. N.D.
carbon source D-Glucose (C) +0.1 +0.5 -0.2 N.D. N.D.
carbon source Azelaic (C) +0.1 +0.5 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.7 +0.0 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 +0.6 -0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.3 -0.0 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.3 +0.4 -0.0 N.D. N.D.
carbon source Gallic Acid (C) +0.1 +0.4 +0.2 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.3 +0.4 N.D. N.D.
carbon source Phenylacetic (C) +0.0 +0.7 -0.0 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 +0.4 +0.2 N.D. N.D.
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