Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04779 and H281DRAFT_04780 are separated by 31 nucleotidesH281DRAFT_04780 and H281DRAFT_04781 are separated by 183 nucleotidesH281DRAFT_04781 and H281DRAFT_04782 are separated by 169 nucleotidesH281DRAFT_04782 and H281DRAFT_04783 are separated by 98 nucleotides H281DRAFT_04779: H281DRAFT_04779 - colanic acid biosynthesis glycosyl transferase WcaI, at 200,838 to 202,169 _04779 H281DRAFT_04780: H281DRAFT_04780 - hypothetical protein, at 202,201 to 202,695 _04780 H281DRAFT_04781: H281DRAFT_04781 - putative colanic acid biosynthesis acetyltransferase WcaF, at 202,879 to 203,493 _04781 H281DRAFT_04782: H281DRAFT_04782 - Choline dehydrogenase, at 203,663 to 205,396 _04782 H281DRAFT_04783: H281DRAFT_04783 - Glycosyltransferase involved in cell wall bisynthesis, at 205,495 to 206,712 _04783
Group Condition H281DRAFT_04779 H281DRAFT_04780 H281DRAFT_04781 H281DRAFT_04782 H281DRAFT_04783
carbon source Azelaic (C) -0.5 N.D. -3.2 -0.0 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. -1.8 +0.1 -0.1
phage Bu1_10 -1.1 N.D. -0.4 +0.1 -0.0
carbon source butyrate (C) -1.6 N.D. +0.1 +0.2 +0.1
carbon source adipate (C) -0.0 N.D. -1.6 +0.1 +0.5
carbon source D-Glucose (C) +0.2 N.D. -1.2 +0.0 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.4 N.D. -1.0 +0.2 -0.6
phage Bu1_100 +0.2 N.D. -1.1 +0.0 -0.1
carbon source Malonic (C) +0.5 N.D. -1.5 +0.1 +0.4
carbon source Valeric (C) +0.3 N.D. -1.0 -0.1 +0.4
carbon source acetate (C) +0.2 N.D. -0.6 -0.3 +0.4
carbon source Gallic Acid (C) +0.3 N.D. -0.9 -0.0 +0.4
carbon source Sebacic (C) -0.3 N.D. -0.4 +0.3 +0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 N.D. -0.5 +0.4 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.4 N.D. +0.9 -0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 N.D. +0.5 +0.3 -0.4
carbon source Malonic (C) +0.3 N.D. +0.6 -0.3 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 N.D. +0.7 -0.1 +0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.7 N.D. +0.6 -0.2 +0.0
carbon source butyrate (C) -0.2 N.D. +0.8 -0.2 +0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.8 N.D. +0.8 -0.2 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 N.D. +0.9 -0.2 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 N.D. -0.3 +0.4 +0.2
carbon source Hexanoic (C) +0.6 N.D. +0.9 -0.1 -0.2
carbon source D-Glucose 20 mM (C) +0.4 N.D. +0.8 -0.3 +0.2
carbon source Malonic (C) +0.4 N.D. +0.7 -0.1 +0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 N.D. +1.2 -0.1 +0.3
carbon source D-Glucose 20 mM (C) +0.3 N.D. +1.1 -0.1 +0.0
carbon source L-Glutamic (C) +0.5 N.D. +0.5 +0.2 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 N.D. +1.4 -0.2 +0.3
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