Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_04719	H281DRAFT_04720	H281DRAFT_04721	H281DRAFT_04722	H281DRAFT_04723
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-2.8	N.D.	-3.3	-3.0	-0.6
carbon source	Valeric (C)	-2.1	N.D.	-3.0	-3.0	+0.1
carbon source	propionate (C)	-2.7	N.D.	-3.1	-2.5	+0.4
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-3.2	N.D.	-1.7	-2.6	-0.2
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-2.5	N.D.	-1.6	-3.1	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-1.8	N.D.	-1.7	-3.1	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.4	N.D.	-2.2	-2.9	-0.3
carbon source	adipate (C)	-2.5	N.D.	-2.9	-0.8	-0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.2	N.D.	-2.1	-3.4	+0.1
control	NoPhageControl	-1.9	N.D.	-2.0	-2.2	-0.4
carbon source	Protocatechuic Acid (C)	-2.2	N.D.	-1.6	-2.6	+0.1
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.7	N.D.	-1.5	-3.0	-0.1
carbon source	Suberic (C)	-1.8	N.D.	-0.5	-4.1	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	N.D.	-2.2	-3.0	+0.1
carbon source	propionate (C)	-2.2	N.D.	-3.0	-0.8	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9	N.D.	-2.3	-2.8	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.5	N.D.	-2.1	-3.6	+0.1
ecofab	LB in EcoFAB_3.5mL	-2.6	N.D.	-2.0	-1.4	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.6	N.D.	-2.1	-3.4	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	N.D.	-2.1	-2.9	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	N.D.	-2.3	-3.1	+0.3
carbon source	2-Deoxy-D-Ribose 20 mM (C)	-2.1	N.D.	-1.9	-1.5	-0.3
carbon source	Dodecandioic (C)	-0.9	N.D.	-2.0	-2.9	+0.0
carbon source	D-Glucose (C)	-1.2	N.D.	-3.0	-1.8	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9	N.D.	-2.3	-2.6	+0.2
carbon source	Pimelic (C)	-2.1	N.D.	-0.4	-3.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	N.D.	-2.3	-2.9	+0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.0	N.D.	-2.1	-3.5	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.2	N.D.	-2.1	-3.4	+0.1
carbon source	Sebacic (C)	-2.1	N.D.	+0.8	-2.5	+0.6