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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_04689 and H281DRAFT_04690 are separated by 152 nucleotides
H281DRAFT_04690 and H281DRAFT_04691 are separated by 205 nucleotides
H281DRAFT_04691 and H281DRAFT_04692 are separated by 124 nucleotides
H281DRAFT_04692 and H281DRAFT_04693 are separated by 66 nucleotides
H281DRAFT_04689: H281DRAFT_04689 - nitrilase, at 95,514 to 96,410
_04689
H281DRAFT_04690: H281DRAFT_04690 - TIGR02099 family protein, at 96,563 to 100,750
_04690
H281DRAFT_04691: H281DRAFT_04691 - glutamate-ammonia-ligase adenylyltransferase, at 100,956 to 103,754
_04691
H281DRAFT_04692: H281DRAFT_04692 - DNA replication and repair protein RecN, at 103,879 to 105,549
_04692
H281DRAFT_04693: H281DRAFT_04693 - NAD+ kinase, at 105,616 to 106,518
_04693
Group
Condition
H281DRAFT
_04689
H281DRAFT
_04690
H281DRAFT
_04691
H281DRAFT
_04692
H281DRAFT
_04693
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
-1.5
-0.3
-0.1
N.D.
carbon source
Hexanoic (C)
+0.0
-0.5
-0.4
-0.6
N.D.
carbon source
2'-Deoxyinosine 5 mM (C)
-0.5
-0.1
-0.2
-0.6
N.D.
carbon source
p-Coumaric (C)
-0.1
-0.6
-0.3
-0.2
N.D.
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
-0.2
+0.2
-0.4
-0.7
N.D.
carbon source
p-Coumaric (C)
+0.0
-0.7
-0.1
-0.2
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.1
+0.3
-0.4
-1.0
N.D.
carbon source
Phenylacetic (C)
-0.1
-0.7
+0.3
-0.5
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.1
+0.3
-0.3
-0.8
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.3
+0.2
-0.2
-0.4
N.D.
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.3
-0.4
-0.7
N.D.
carbon source
Phenylacetic (C)
-0.1
-1.0
+0.4
+0.1
N.D.
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.5
-0.5
-0.4
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.0
+0.4
-0.1
-0.7
N.D.
carbon source
succinate (C)
-0.3
-0.1
+0.4
-0.5
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.1
+0.7
-0.5
-0.6
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.0
+0.8
-0.4
-0.4
N.D.
carbon source
Glycerol (C)
-0.1
-0.1
+0.6
-0.4
N.D.
carbon source
Azelaic (C)
-0.3
-0.2
+0.2
+0.4
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.1
+0.9
-0.4
-0.4
N.D.
phage
Bu1_10
+0.4
+0.1
+0.4
-0.4
N.D.
carbon source
Dodecandioic (C)
+0.1
-0.5
+0.6
+0.3
N.D.
carbon source
Sebacic (C)
-0.0
-0.3
+0.6
+0.4
N.D.
carbon source
adipate (C)
-0.3
-0.2
+1.3
+0.1
N.D.
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.1
+0.3
+0.2
+0.5
N.D.
carbon source
adipate (C)
-0.2
-0.1
+1.4
+0.3
N.D.
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.1
-0.6
+3.4
-0.3
N.D.
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.1
-0.5
+3.3
+0.0
N.D.
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
-0.1
-0.5
+5.2
-0.4
N.D.
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.0
-0.6
+5.6
-0.7
N.D.
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