Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04682 and H281DRAFT_04683 are separated by 136 nucleotidesH281DRAFT_04683 and H281DRAFT_04684 are separated by 139 nucleotidesH281DRAFT_04684 and H281DRAFT_04685 are separated by 508 nucleotidesH281DRAFT_04685 and H281DRAFT_04686 are separated by 104 nucleotides H281DRAFT_04682: H281DRAFT_04682 - glycolate oxidase FAD binding subunit, at 85,645 to 86,733 _04682 H281DRAFT_04683: H281DRAFT_04683 - glycolate oxidase, at 86,870 to 88,363 _04683 H281DRAFT_04684: H281DRAFT_04684 - D-lactate dehydrogenase (cytochrome), at 88,503 to 89,918 _04684 H281DRAFT_04685: H281DRAFT_04685 - cob(I)alamin adenosyltransferase, at 90,427 to 90,981 _04685 H281DRAFT_04686: H281DRAFT_04686 - nitric oxide dioxygenase, at 91,086 to 92,291 _04686
Group Condition H281DRAFT_04682 H281DRAFT_04683 H281DRAFT_04684 H281DRAFT_04685 H281DRAFT_04686
carbon source D,L-Lactate (C) -1.3 -1.3 -0.5 +0.3 +0.1
carbon source D,L-Lactate (C) -0.9 -1.1 -0.6 +0.3 -0.1
carbon source D,L-Lactate (C) -0.9 -1.3 -0.5 +0.3 +0.1
carbon source Glycerol (C) -0.8 -0.6 -0.5 -0.2 -0.0
carbon source Glycerol (C) -0.6 -1.0 -0.6 +0.1 -0.0
carbon source D,L-Lactate (C) -1.1 -1.0 -0.6 +0.5 +0.2
phage Bu1_100 -0.6 -0.2 -0.4 -0.1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.4 -0.5 -0.3 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.5 -0.2 -0.3 -0.1
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.0 -0.0 -1.3 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.4 -0.3 -0.2 -0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.3 +0.2 -0.8 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -0.7 -0.1 -0.2 +0.3
carbon source Azelaic (C) -0.4 -0.3 -0.2 -0.3 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.5 -0.1 +0.3 -0.3 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.7 -0.1 +0.4 -0.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.3 +0.1 +0.3 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.2 +0.4 -0.1 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 -0.2 +0.7 -0.2 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.4 +0.1 +0.5 -0.3 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 +0.4 +0.2 -0.0 -0.2
carbon source Malonic (C) +0.6 +0.8 +0.1 -0.4 +0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +0.4 +0.2 +0.1 +0.0
carbon source Malonic (C) +0.7 +0.9 +0.2 -0.3 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +0.6 +0.3 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.6 +0.7 +0.3 -0.2 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.6 +0.6 +0.3 +0.0 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.6 +0.8 +0.3 +0.1 -0.1
carbon source Hexanoic (C) +1.3 +1.7 +0.9 -0.4 -0.1
carbon source Hexanoic (C) +1.4 +1.4 +0.7 +0.1 +0.3
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