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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_04622 and H281DRAFT_04623 are separated by 356 nucleotides
H281DRAFT_04623 and H281DRAFT_04624 are separated by 117 nucleotides
H281DRAFT_04624 and H281DRAFT_04625 are separated by 115 nucleotides
H281DRAFT_04625 and H281DRAFT_04626 are separated by 76 nucleotides
H281DRAFT_04622: H281DRAFT_04622 - putative cardiolipin synthase, at 16,070 to 17,329
_04622
H281DRAFT_04623: H281DRAFT_04623 - transcriptional regulator, TetR family, at 17,686 to 18,285
_04623
H281DRAFT_04624: H281DRAFT_04624 - hypothetical protein, at 18,403 to 20,190
_04624
H281DRAFT_04625: H281DRAFT_04625 - 3-hydroxyacyl-CoA dehydrogenase, at 20,306 to 22,741
_04625
H281DRAFT_04626: H281DRAFT_04626 - acetyl-CoA acyltransferase, at 22,818 to 24,017
_04626
Group
Condition
H281DRAFT
_04622
H281DRAFT
_04623
H281DRAFT
_04624
H281DRAFT
_04625
H281DRAFT
_04626
carbon source
4-Hydroxybenzoic Acid (C)
-5.6
+0.0
-5.9
-1.0
-0.3
carbon source
Phenylacetic (C)
-1.7
-3.0
-4.0
-0.5
-0.2
carbon source
Phenylacetic (C)
-1.5
-2.8
-3.2
-0.3
-0.4
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.7
-2.4
-0.6
-0.3
-0.4
carbon source
Protocatechuic Acid (C)
-0.8
-1.0
-2.3
-0.1
+0.4
carbon source
Protocatechuic Acid (C)
-0.4
-0.6
-2.5
-0.2
+0.4
carbon source
2-Deoxy-D-Ribose (C)
-0.0
-2.3
-0.1
-0.1
+0.1
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.4
-1.6
-0.5
-0.1
+0.1
carbon source
propionate (C)
-0.1
-2.1
-0.3
-0.1
+0.2
carbon source
4-Methyl-2-oxopentanoic (C)
-0.1
-1.2
-0.6
-0.1
-0.1
in planta
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.1
-1.2
-0.9
-0.1
+0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-1.6
-0.1
+0.1
-0.3
carbon source
2-furoic (C)
-0.2
-1.1
-0.5
-0.1
-0.0
carbon source
p-Coumaric (C)
-0.3
-0.5
-1.1
-0.1
-0.1
carbon source
2-Deoxy-D-Ribose 10 mM (C)
-0.3
-1.3
-0.2
+0.1
-0.2
carbon source
acetate (C)
-0.4
-1.0
-0.2
-0.2
+0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.3
-1.2
-0.6
-0.0
+0.0
carbon source
propionate (C)
+0.0
-1.1
-0.5
-0.0
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-1.5
-0.0
+0.1
+0.3
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.4
-1.2
-0.7
+0.0
+0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.1
-1.4
-0.1
+0.0
+0.4
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-1.3
-0.2
+0.1
+0.4
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days
+0.0
-1.2
-0.1
+0.2
+0.7
carbon source
Hexanoic (C)
-1.2
+2.6
-1.0
-0.4
-0.2
carbon source
D-Glucose (C)
+0.6
-0.9
-0.1
-0.0
+0.4
carbon source
adipate (C)
-0.8
+1.8
+0.0
-0.2
+0.1
carbon source
Hexanoic (C)
-0.9
+2.5
-0.6
-0.4
+0.6
carbon source
butyrate (C)
-0.1
+1.3
-0.3
-0.1
+0.4
carbon source
adipate (C)
-0.5
+1.9
+0.1
+0.2
+0.1
carbon source
Dodecandioic (C)
-0.3
+1.4
+0.7
+0.2
+0.5
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