Fitness for 3 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_04606	H281DRAFT_04607	H281DRAFT_04608
carbon source	Malonic (C)	-5.2	-0.4	N.D.
carbon source	adipate (C)	-2.7	-1.1	N.D.
carbon source	Hexanoic (C)	-2.8	-1.1	N.D.
carbon source	succinate (C)	-1.7	-0.8	N.D.
carbon source	butyrate (C)	-2.2	+0.1	N.D.
carbon source	Malonic (C)	-1.2	-0.8	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	-0.9	N.D.
carbon source	Protocatechuic Acid (C)	-0.9	-1.0	N.D.
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.7	-0.0	N.D.
carbon source	Pimelic (C)	-0.9	-0.8	N.D.
carbon source	succinate (C)	-1.2	-0.5	N.D.
carbon source	Glycerol (C)	-1.3	-0.3	N.D.
carbon source	Protocatechuic Acid (C)	-1.6	+0.1	N.D.
carbon source	acetate (C)	-0.9	-0.7	N.D.
carbon source	3-hydroxybutyric (C)	-1.5	-0.0	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8	-0.7	N.D.
carbon source	D-Glucose (C)	-1.4	-0.1	N.D.
carbon source	2-furoic (C)	-1.5	+0.2	N.D.
carbon source	Glycerol (C)	-1.1	+0.5	N.D.
carbon source	D-Glucose (C)	-1.4	+0.7	N.D.
carbon source	2'-Deoxyinosine 10 mM (C)	-1.1	+0.4	N.D.
carbon source	D-Glucose 20 mM (C)	-1.1	+0.6	N.D.
ecofab	LB in EcoFAB_3.5mL	-1.0	+0.5	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM	-1.1	+0.7	N.D.
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.8	+0.6	N.D.
carbon source	2'-Deoxyinosine 5 mM (C)	-0.8	+0.7	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.9	+0.9	N.D.
control	NoPhageControl	+1.0	-0.6	N.D.
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	+1.2	N.D.
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.6	+1.6	N.D.