Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04550 and H281DRAFT_04551 are separated by 355 nucleotidesH281DRAFT_04551 and H281DRAFT_04552 are separated by 111 nucleotidesH281DRAFT_04552 and H281DRAFT_04553 are separated by 112 nucleotidesH281DRAFT_04553 and H281DRAFT_04554 are separated by 134 nucleotides H281DRAFT_04550: H281DRAFT_04550 - RNA polymerase, sigma-24 subunit, RpoE, at 281,560 to 282,123 _04550 H281DRAFT_04551: H281DRAFT_04551 - acetolactate synthase, large subunit, at 282,479 to 284,242 _04551 H281DRAFT_04552: H281DRAFT_04552 - acetolactate synthase, small subunit, at 284,354 to 284,845 _04552 H281DRAFT_04553: H281DRAFT_04553 - ketol-acid reductoisomerase, at 284,958 to 285,974 _04553 H281DRAFT_04554: H281DRAFT_04554 - phosphatidylserine decarboxylase, at 286,109 to 286,747 _04554
Group Condition H281DRAFT_04550 H281DRAFT_04551 H281DRAFT_04552 H281DRAFT_04553 H281DRAFT_04554
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.8 N.D. -0.8 -4.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -2.4 N.D. -0.1 -5.9 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 N.D. -1.5 -4.9 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 N.D. -1.6 -5.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 N.D. -1.5 -4.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 N.D. -0.3 -4.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 N.D. -1.4 -3.7 N.D.
carbon source Gallic Acid (C) -0.3 N.D. -0.5 -5.7 N.D.
carbon source 3-Hydroxypropionate (C) +0.2 N.D. -1.9 -4.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 N.D. -1.2 -4.3 N.D.
carbon source L-Glutamic (C) +0.0 N.D. -0.4 -5.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 N.D. -1.2 -3.6 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.9 N.D. -2.9 -2.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 N.D. -1.1 -3.5 N.D.
carbon source D-Glucose (C) -0.0 N.D. -1.2 -4.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 N.D. -0.5 -4.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.3 N.D. -1.8 -2.7 N.D.
carbon source Glycerol (C) +0.2 N.D. -0.5 -5.4 N.D.
carbon source 3-Hydroxypropionate (C) -0.0 N.D. -1.8 -3.8 N.D.
carbon source D-Galactose (C) +0.0 N.D. -0.7 -4.9 N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. -1.9 -3.7 N.D.
carbon source Gallic Acid (C) +0.1 N.D. -0.7 -5.0 N.D.
carbon source adipate (C) +0.2 N.D. +0.8 -6.5 N.D.
carbon source Protocatechuic Acid (C) +0.3 N.D. -0.2 -5.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 N.D. -0.8 -4.7 N.D.
carbon source 2-furoic (C) -0.0 N.D. +0.3 -5.5 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.8 N.D. -0.1 -4.8 N.D.
carbon source Phenylacetic (C) +0.1 N.D. +1.5 -4.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 N.D. +2.3 -4.5 N.D.
carbon source Phenylacetic (C) +0.1 N.D. +2.1 -4.3 N.D.
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