Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04548 and H281DRAFT_04549 are separated by 16 nucleotidesH281DRAFT_04549 and H281DRAFT_04550 overlap by 4 nucleotidesH281DRAFT_04550 and H281DRAFT_04551 are separated by 355 nucleotidesH281DRAFT_04551 and H281DRAFT_04552 are separated by 111 nucleotides H281DRAFT_04548: H281DRAFT_04548 - Protein of unknown function (DUF3106), at 280,360 to 281,118 _04548 H281DRAFT_04549: H281DRAFT_04549 - Protein of unknown function (DUF3619), at 281,135 to 281,563 _04549 H281DRAFT_04550: H281DRAFT_04550 - RNA polymerase, sigma-24 subunit, RpoE, at 281,560 to 282,123 _04550 H281DRAFT_04551: H281DRAFT_04551 - acetolactate synthase, large subunit, at 282,479 to 284,242 _04551 H281DRAFT_04552: H281DRAFT_04552 - acetolactate synthase, small subunit, at 284,354 to 284,845 _04552
Group Condition H281DRAFT_04548 H281DRAFT_04549 H281DRAFT_04550 H281DRAFT_04551 H281DRAFT_04552
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.5 -3.8 N.D. -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.5 -1.0 N.D. -1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 -1.6 N.D. -1.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.5 -1.3 N.D. -1.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.7 -2.4 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 -1.7 N.D. -1.4
carbon source Hexanoic (C) N.D. -1.1 +0.0 N.D. -1.9
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.8 -0.9 N.D. -2.9
carbon source Hexanoic (C) N.D. -1.0 +0.1 N.D. -2.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 -1.5 N.D. -1.5
carbon source 3-Hydroxypropionate (C) N.D. -0.9 -0.0 N.D. -1.8
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.5 -0.2 N.D. -0.9
carbon source 3-Hydroxypropionate (C) N.D. -0.8 +0.2 N.D. -1.9
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.7 +0.1 N.D. -1.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 -1.3 N.D. -1.2
carbon source butyrate (C) N.D. -0.9 +0.0 N.D. -1.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 -1.3 N.D. -1.1
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.6 -0.1 N.D. -0.6
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -1.0 +0.1 N.D. -1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.0 -1.9 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 -0.9 N.D. -1.2
carbon source adipate (C) N.D. -1.7 -0.0 N.D. +0.9
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +1.1 -0.7 N.D. -1.2
carbon source adipate (C) N.D. -1.2 +0.2 N.D. +0.8
carbon source Hydroxy-L-Proline (C) N.D. -1.1 +0.3 N.D. +1.0
phage Bu1_100 N.D. -0.9 +0.2 N.D. +1.1
phage Bu1_100 N.D. -0.5 +0.4 N.D. +1.2
carbon source Phenylacetic (C) N.D. +1.1 +0.1 N.D. +1.5
carbon source Phenylacetic (C) N.D. +0.9 +0.1 N.D. +2.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. +1.9 -0.2 N.D. +2.3
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