Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04515 and H281DRAFT_04516 are separated by 9 nucleotidesH281DRAFT_04516 and H281DRAFT_04517 are separated by 191 nucleotidesH281DRAFT_04517 and H281DRAFT_04518 are separated by 66 nucleotidesH281DRAFT_04518 and H281DRAFT_04519 are separated by 4 nucleotides H281DRAFT_04515: H281DRAFT_04515 - RNAse G, at 247,268 to 248,737 _04515 H281DRAFT_04516: H281DRAFT_04516 - septum formation protein, at 248,747 to 249,376 _04516 H281DRAFT_04517: H281DRAFT_04517 - 23S rRNA (pseudouridine1915-N3)-methyltransferase, at 249,568 to 250,038 _04517 H281DRAFT_04518: H281DRAFT_04518 - ribosome-associated protein, at 250,105 to 250,560 _04518 H281DRAFT_04519: H281DRAFT_04519 - nicotinate-nucleotide adenylyltransferase, at 250,565 to 251,236 _04519
Group Condition H281DRAFT_04515 H281DRAFT_04516 H281DRAFT_04517 H281DRAFT_04518 H281DRAFT_04519
carbon source butyrate (C) -4.0 -0.4 +0.7 -0.8 N.D.
phage Bu1_100 -2.0 +0.1 -0.3 -1.9 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -3.6 -0.3 -0.1 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -2.7 -0.1 -0.8 -0.0 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -3.7 -0.1 +0.2 +0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -3.2 +0.3 -0.3 +0.1 N.D.
control NoPhageControl -2.4 +0.2 +0.0 -0.8 N.D.
carbon source Sebacic (C) -1.4 -0.3 +0.2 -1.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -2.4 -0.2 +0.3 -0.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.7 -0.1 +0.1 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 +0.1 -0.2 +0.1 N.D.
carbon source Dodecandioic (C) -2.4 -0.1 +0.3 -0.4 N.D.
phage Bu1_100 -3.2 +0.5 +0.3 -0.1 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -2.7 -0.2 +0.3 +0.2 N.D.
carbon source propionate (C) -1.9 +0.4 -0.1 -0.6 N.D.
carbon source D-Glucose (C) -1.8 +0.2 +0.3 -1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 +0.1 +0.4 +0.1 N.D.
phage Bu1_10 -1.7 -0.4 +0.6 -0.7 N.D.
carbon source L-Glutamic (C) -2.2 +0.1 +0.2 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -2.2 +0.1 +0.1 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -2.5 +0.1 +0.6 -0.2 N.D.
carbon source Protocatechuic Acid (C) -2.2 +0.2 +0.2 -0.2 N.D.
carbon source D-Galactose (C) -2.0 +0.2 +0.2 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.7 +0.2 +0.6 +0.1 N.D.
carbon source Protocatechuic Acid (C) -1.7 +0.1 +0.3 -0.6 N.D.
carbon source D-Galactose (C) -1.7 +0.2 +0.2 -0.5 N.D.
carbon source D-Glucose 20 mM (C) -2.2 +0.2 +0.0 +0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -2.0 +0.4 +0.4 -0.1 N.D.
carbon source Hydroxy-L-Proline (C) -1.6 +0.3 +0.4 -0.3 N.D.
carbon source adipate (C) +1.5 +0.3 +0.4 -0.9 N.D.
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