Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04481 and H281DRAFT_04482 overlap by 4 nucleotidesH281DRAFT_04482 and H281DRAFT_04483 are separated by 167 nucleotidesH281DRAFT_04483 and H281DRAFT_04484 are separated by 37 nucleotidesH281DRAFT_04484 and H281DRAFT_04485 are separated by 240 nucleotides H281DRAFT_04481: H281DRAFT_04481 - Uncharacterized membrane protein, at 212,651 to 213,058 _04481 H281DRAFT_04482: H281DRAFT_04482 - NAD(P)H dehydrogenase (quinone), at 213,055 to 213,657 _04482 H281DRAFT_04483: H281DRAFT_04483 - tRNA-processing RNAse BN, at 213,825 to 215,135 _04483 H281DRAFT_04484: H281DRAFT_04484 - hypothetical protein, at 215,173 to 215,493 _04484 H281DRAFT_04485: H281DRAFT_04485 - Pimeloyl-ACP methyl ester carboxylesterase, at 215,734 to 216,567 _04485
Group Condition H281DRAFT_04481 H281DRAFT_04482 H281DRAFT_04483 H281DRAFT_04484 H281DRAFT_04485
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.6 -1.0 +0.1 -0.4 -0.3
carbon source Hexanoic (C) -0.7 -0.7 -0.2 -0.5 +0.3
phage Bu1_100 +0.5 -2.0 -0.3 +0.1 +0.1
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -1.7 +0.1 +0.2 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.5 -0.9 -0.1 +0.1 -0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.5 +0.1 +0.1 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.6 -0.6 -0.0 +0.2 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 -1.0 -0.1 +0.1 -0.2
phage Bu1_10 +0.1 -1.2 -0.0 -0.1 +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.5 -0.8 +0.1 +0.3 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.9 -0.1 -0.2 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 -0.4 -0.5 +0.3 -0.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -0.4 -0.0 +0.2 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -1.1 +0.1 -0.3 +0.4
phage Bu1_100 +0.2 -1.3 +0.3 -0.3 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.8 +0.2 -0.2 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 +0.5 -0.7 -0.2 -0.1
ecofab LB in EcoFAB_3.5mL -0.6 -0.1 +0.1 +0.3 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -1.0 +0.1 +0.0 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 -1.0 +0.0 -0.1 +0.4
carbon source butyrate (C) +0.3 -0.5 -0.2 -0.4 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 -0.4 +0.1 +0.4 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 -0.3 -0.2 -0.4 +0.5
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.5 +0.0 +0.3 +0.2
carbon source Valeric (C) -0.7 -0.1 +0.2 +0.3 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.5 +0.1 -0.9 +0.1
carbon source adipate (C) -0.6 +0.2 +0.3 +0.3 -0.0
carbon source Dodecandioic (C) -0.3 +0.7 +0.0 +0.3 +0.1
carbon source propionate (C) +0.3 +0.7 +0.1 +0.2 -0.2
carbon source Protocatechuic Acid (C) -0.1 +0.8 +0.1 +0.2 +0.2
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