Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04460 and H281DRAFT_04461 are separated by 13 nucleotidesH281DRAFT_04461 and H281DRAFT_04462 are separated by 140 nucleotidesH281DRAFT_04462 and H281DRAFT_04463 are separated by 277 nucleotidesH281DRAFT_04463 and H281DRAFT_04464 overlap by 8 nucleotides H281DRAFT_04460: H281DRAFT_04460 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 184,002 to 184,841 _04460 H281DRAFT_04461: H281DRAFT_04461 - monosaccharide ABC transporter membrane protein, CUT2 family, at 184,855 to 186,027 _04461 H281DRAFT_04462: H281DRAFT_04462 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 186,168 to 187,214 _04462 H281DRAFT_04463: H281DRAFT_04463 - transcriptional regulator, RpiR family, at 187,492 to 188,373 _04463 H281DRAFT_04464: H281DRAFT_04464 - myo-inositol 2-dehydrogenase, at 188,366 to 189,385 _04464
Group Condition H281DRAFT_04460 H281DRAFT_04461 H281DRAFT_04462 H281DRAFT_04463 H281DRAFT_04464
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -2.8 -1.8 -2.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -1.9 -1.6 -2.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -1.3 -1.4 -1.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.7 -2.0 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.7 -1.6 -0.6
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.6 -1.3 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.4 -1.1 -0.9
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.7 -0.7 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.8 -0.5 -0.8
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. -0.2 -0.6 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.1 -1.0 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.1 -0.3 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.1 -0.6 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.1 -0.5 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.5 -0.7 -0.0
carbon source 3-hydroxybutyric (C) N.D. N.D. -0.4 -0.5 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.3 -0.9 -0.4
carbon source D-Glucose (C) N.D. N.D. -0.1 -0.1 -0.8
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. -0.0 -0.8 -0.2
carbon source Glycerol (C) N.D. N.D. -0.1 -0.4 -0.4
carbon source Hydroxy-L-Proline (C) N.D. N.D. +0.1 -0.9 +0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. +0.1 -0.7 -0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.3 -0.9 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. +0.3 -0.5 -0.1
carbon source D-Glucose 20 mM (C) N.D. N.D. -0.4 +0.3 -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. -0.4 +0.4 -0.3
carbon source Valeric (C) N.D. N.D. +0.1 -0.5 +0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. -0.3 +0.5 +0.2
carbon source Hexanoic (C) N.D. N.D. +0.2 -0.6 +0.9
carbon source succinate (C) N.D. N.D. +0.4 +0.4 +0.1
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