Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04456 and H281DRAFT_04457 overlap by 4 nucleotidesH281DRAFT_04457 and H281DRAFT_04458 are separated by 10 nucleotidesH281DRAFT_04458 and H281DRAFT_04459 overlap by 4 nucleotidesH281DRAFT_04459 and H281DRAFT_04460 are separated by 63 nucleotides H281DRAFT_04456: H281DRAFT_04456 - 5-deoxyglucuronate isomerase, at 178,150 to 178,950 _04456 H281DRAFT_04457: H281DRAFT_04457 - 2-keto-myo-inositol dehydratase, at 178,947 to 179,897 _04457 H281DRAFT_04458: H281DRAFT_04458 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 179,908 to 181,893 _04458 H281DRAFT_04459: H281DRAFT_04459 - 5-dehydro-2-deoxygluconokinase, at 181,890 to 183,938 _04459 H281DRAFT_04460: H281DRAFT_04460 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 184,002 to 184,841 _04460
Group Condition H281DRAFT_04456 H281DRAFT_04457 H281DRAFT_04458 H281DRAFT_04459 H281DRAFT_04460
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.9 -2.5 -2.4 -2.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -2.0 -1.9 -1.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.5 -1.6 -1.9 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.9 -0.9 -0.7 -1.0 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.0 -0.3 -0.7 N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.5 -0.4 -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -0.5 -0.5 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6 -0.3 -0.5 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.4 -0.3 -0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.1 -0.3 -0.3 N.D.
carbon source adipate (C) -0.7 -0.2 -0.0 -0.2 N.D.
phage Bu1_100 -0.9 +0.0 +0.1 -0.2 N.D.
carbon source Valeric (C) -0.0 -0.6 +0.2 -0.5 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.4 -0.6 +0.1 +0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.1 -0.3 -0.3 N.D.
carbon source Malonic (C) -0.4 -0.3 +0.4 -0.2 N.D.
carbon source succinate (C) +0.4 -0.4 -0.3 -0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 +0.5 +0.0 -0.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 +0.2 +0.2 +0.0 N.D.
carbon source adipate (C) -0.1 +0.3 +0.3 -0.5 N.D.
carbon source propionate (C) -0.2 +0.5 +0.4 -0.3 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 -0.4 +0.0 +0.3 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 -0.3 +0.4 +0.1 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.6 -0.2 +0.3 -0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 -0.4 +0.5 +0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 -0.1 +0.4 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.7 +0.2 +0.2 +0.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 +0.2 +0.4 +0.2 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.7 +0.0 +0.3 +0.4 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 +0.1 +0.6 +0.4 N.D.
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