Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04403 and H281DRAFT_04404 are separated by 230 nucleotidesH281DRAFT_04404 and H281DRAFT_04405 are separated by 11 nucleotidesH281DRAFT_04405 and H281DRAFT_04406 are separated by 142 nucleotidesH281DRAFT_04406 and H281DRAFT_04407 are separated by 223 nucleotides H281DRAFT_04403: H281DRAFT_04403 - carbamoyl-phosphate synthase large subunit, at 119,446 to 122,700 _04403 H281DRAFT_04404: H281DRAFT_04404 - GreA/GreB family elongation factor, at 122,931 to 123,407 _04404 H281DRAFT_04405: H281DRAFT_04405 - protein of unknown function (DUF4149), at 123,419 to 123,937 _04405 H281DRAFT_04406: H281DRAFT_04406 - putative RNA-binding protein, YhbY family, at 124,080 to 124,607 _04406 H281DRAFT_04407: H281DRAFT_04407 - 23S rRNA Um-2552 2'-O-methyltransferase, at 124,831 to 125,493 _04407
Group Condition H281DRAFT_04403 H281DRAFT_04404 H281DRAFT_04405 H281DRAFT_04406 H281DRAFT_04407
carbon source 4-Hydroxybenzoic Acid (C) N.D. -3.8 -0.2 +1.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.5 -0.2 -0.6 N.D.
carbon source Azelaic (C) N.D. -2.7 -0.0 +0.6 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.9 -0.2 -0.8 N.D.
carbon source acetate (C) N.D. -0.6 -0.1 -1.0 N.D.
carbon source Valeric (C) N.D. -2.0 +0.1 +0.2 N.D.
ecofab LB in EcoFAB_3.5mL N.D. -0.4 -0.0 -1.3 N.D.
carbon source Sebacic (C) N.D. -1.3 -0.2 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.3 +0.1 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.2 -0.0 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.9 +0.1 -0.3 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.5 +0.1 -0.8 N.D.
carbon source Phenylacetic (C) N.D. -1.2 -0.3 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.0 -0.3 +0.2 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.9 +0.2 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -1.7 +0.0 +0.7 N.D.
phage Bu1_100 N.D. +0.8 +0.1 -1.7 N.D.
carbon source D-Galactose (C) N.D. -0.7 -0.2 +0.5 N.D.
carbon source Hexanoic (C) N.D. -0.7 -0.3 +0.6 N.D.
carbon source Phenylacetic (C) N.D. -1.2 -0.1 +1.0 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.7 -0.2 +0.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.1 +0.3 +0.6 N.D.
carbon source Hexanoic (C) N.D. -1.1 -0.0 +1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.8 -0.1 +0.8 N.D.
phage Bu1_10 N.D. +1.1 +0.2 -1.0 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +2.5 -0.2 -1.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. +1.1 +0.1 -0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +2.1 -0.1 -0.8 N.D.
carbon source Malonic (C) N.D. -0.0 +0.1 +1.2 N.D.
carbon source adipate (C) N.D. +1.3 +0.1 +0.1 N.D.
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