Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04389 and H281DRAFT_04390 are separated by 98 nucleotidesH281DRAFT_04390 and H281DRAFT_04391 are separated by 620 nucleotidesH281DRAFT_04391 and H281DRAFT_04392 are separated by 255 nucleotidesH281DRAFT_04392 and H281DRAFT_04393 are separated by 151 nucleotides H281DRAFT_04389: H281DRAFT_04389 - trehalose 6-phosphate synthase, at 102,047 to 103,507 _04389 H281DRAFT_04390: H281DRAFT_04390 - ATP-binding cassette, subfamily B, at 103,606 to 105,528 _04390 H281DRAFT_04391: H281DRAFT_04391 - Glycosyltransferase involved in cell wall bisynthesis, at 106,149 to 107,213 _04391 H281DRAFT_04392: H281DRAFT_04392 - hypothetical protein, at 107,469 to 108,323 _04392 H281DRAFT_04393: H281DRAFT_04393 - putative membrane protein, at 108,475 to 108,939 _04393
Group Condition H281DRAFT_04389 H281DRAFT_04390 H281DRAFT_04391 H281DRAFT_04392 H281DRAFT_04393
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 -2.2 N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -1.8 -1.8 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.4 -2.3 N.D. -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 -1.0 -1.7 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.6 -1.6 N.D. +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -1.1 -1.3 N.D. +0.1
carbon source p-Coumaric (C) +0.1 +1.0 +1.1 N.D. -0.4
carbon source D-Galactose (C) -0.2 +0.9 +1.2 N.D. +0.2
carbon source 2-furoic (C) +0.1 +1.1 +1.2 N.D. -0.2
carbon source D-Glucose (C) +0.1 +1.1 +1.1 N.D. -0.1
carbon source 2-furoic (C) -0.0 +1.2 +1.3 N.D. -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 +1.3 +1.1 N.D. -0.0
carbon source D-Glucose 20 mM (C) +0.1 +1.3 +1.1 N.D. -0.1
carbon source D-Glucose 20 mM (C) +0.0 +1.2 +1.0 N.D. +0.2
carbon source 4-Methyl-2-oxopentanoic (C) +0.2 +1.1 +1.4 N.D. -0.2
carbon source 4-Methyl-2-oxopentanoic (C) +0.1 +1.2 +1.4 N.D. +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 +1.2 +1.3 N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 +1.2 +1.4 N.D. +0.3
carbon source Malonic (C) -0.1 +1.7 +1.9 N.D. -0.2
carbon source Malonic (C) -0.1 +1.5 +1.5 N.D. +0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 +2.0 +2.0 N.D. -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 +2.6 +2.3 N.D. +0.3
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 +2.6 +2.3 N.D. +0.1
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 +2.6 +2.3 N.D. -0.0
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 +2.5 +2.3 N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.0 +2.6 +2.4 N.D. +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.0 +2.6 +2.4 N.D. +0.4
carbon source Phenylacetic (C) +0.3 +2.5 +2.7 N.D. -0.1
carbon source Phenylacetic (C) +0.3 +2.6 +2.7 N.D. +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.8 +5.3 +4.7 N.D. -0.0
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