Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04363 and H281DRAFT_04364 overlap by 14 nucleotidesH281DRAFT_04364 and H281DRAFT_04365 overlap by 4 nucleotidesH281DRAFT_04365 and H281DRAFT_04366 are separated by 20 nucleotidesH281DRAFT_04366 and H281DRAFT_04367 are separated by 85 nucleotides H281DRAFT_04363: H281DRAFT_04363 - GTP-binding protein Era, at 80,713 to 81,576 _04363 H281DRAFT_04364: H281DRAFT_04364 - DNA replication and repair protein RecO, at 81,563 to 82,480 _04364 H281DRAFT_04365: H281DRAFT_04365 - pyridoxine 5'-phosphate synthase, at 82,477 to 83,241 _04365 H281DRAFT_04366: H281DRAFT_04366 - holo-[acyl-carrier protein] synthase, at 83,262 to 83,687 _04366 H281DRAFT_04367: H281DRAFT_04367 - beta-N-acetylhexosaminidase, at 83,773 to 84,801 _04367
Group Condition H281DRAFT_04363 H281DRAFT_04364 H281DRAFT_04365 H281DRAFT_04366 H281DRAFT_04367
carbon source Suberic (C) N.D. +0.2 N.D. N.D. -1.5
carbon source propionate (C) N.D. +0.3 N.D. N.D. -1.4
carbon source Azelaic (C) N.D. -0.1 N.D. N.D. -0.9
carbon source Pimelic (C) N.D. +0.1 N.D. N.D. -1.0
carbon source propionate (C) N.D. +0.1 N.D. N.D. -1.0
carbon source adipate (C) N.D. +0.3 N.D. N.D. -1.1
carbon source Glycerol (C) N.D. -0.3 N.D. N.D. -0.4
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 N.D. N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.5 N.D. N.D. -0.2
carbon source Sebacic (C) N.D. -0.1 N.D. N.D. -0.5
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 N.D. N.D. -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.5 N.D. N.D. -0.1
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.4 N.D. N.D. -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.3 N.D. N.D. -0.4
control NoPhageControl N.D. -0.4 N.D. N.D. -0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.1 N.D. N.D. -0.5
carbon source p-Coumaric (C) N.D. -0.5 N.D. N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.5 N.D. N.D. -0.0
carbon source Valeric (C) N.D. -0.1 N.D. N.D. -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.3 N.D. N.D. -0.3
carbon source Hexanoic (C) N.D. +0.3 N.D. N.D. -0.9
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.2 N.D. N.D. -0.3
phage Bu1_100 N.D. +0.6 N.D. N.D. -1.0
phage Bu1_100 N.D. +0.3 N.D. N.D. -0.8
carbon source Hexanoic (C) N.D. +0.2 N.D. N.D. -0.6
carbon source succinate (C) N.D. +0.2 N.D. N.D. -0.5
carbon source Protocatechuic Acid (C) N.D. +0.2 N.D. N.D. -0.5
phage Bu1_10 N.D. +0.6 N.D. N.D. -0.8
carbon source Malonic (C) N.D. +0.4 N.D. N.D. -0.3
carbon source D-Glucose (C) N.D. +0.3 N.D. N.D. +0.4
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