Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_04320	H281DRAFT_04321	H281DRAFT_04322	H281DRAFT_04323	H281DRAFT_04324
carbon source	2-Deoxy-D-ribonic lithium salt (C)	N.D.	-0.1	-0.3	-0.9	-0.2
carbon source	adipate (C)	N.D.	+0.2	-0.5	-0.5	-0.0
lb	LB	N.D.	-0.2	-0.6	+0.2	-0.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	+0.1	-0.4	-0.8	+0.3
carbon source	L-Glutamic (C)	N.D.	-0.2	+0.3	-0.3	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	+0.1	-0.3	+0.2	-0.5
carbon source	adipate (C)	N.D.	-0.1	+0.0	-0.8	+0.3
carbon source	Gallic Acid (C)	N.D.	+0.1	-0.5	+0.3	-0.2
carbon source	propionate (C)	N.D.	+0.1	+0.0	-0.8	+0.4
carbon source	Phenylacetic (C)	N.D.	-0.1	+0.2	-0.8	+0.4
carbon source	Hexanoic (C)	N.D.	-0.0	+0.4	-0.6	-0.1
carbon source	2'-Deoxyinosine 10 mM (C)	N.D.	+0.2	-0.1	-0.6	+0.3
carbon source	2'-Deoxyinosine 10 mM (C)	N.D.	+0.1	+0.0	-0.7	+0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	+0.2	+0.3	-0.7	+0.1
carbon source	D-Glucose 20 mM (C)	N.D.	+0.2	+0.1	-0.7	+0.3
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.2	+0.3	-0.5	+0.1
phage	Bu1_100	N.D.	-0.1	+0.5	-0.5	+0.3
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	+0.2	+0.5	-0.5	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.2	-0.0	-0.4	+0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	+0.1	-0.0	+0.8	-0.3
carbon source	acetate (C)	N.D.	+0.1	+0.2	-0.5	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.2	-0.3	+0.3	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.3	+0.0	-0.3	+0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-0.0	-0.3	+0.8	+0.1
carbon source	2-Deoxy-D-Ribose 10 mM (C)	N.D.	+0.2	+0.4	-0.2	+0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.0	+0.2	+0.8	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.2	-0.0	+1.3	-0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	+0.0	-0.1	+1.3	+0.1
carbon source	Dodecandioic (C)	N.D.	+0.1	+0.3	+1.0	+0.3
carbon source	Valeric (C)	N.D.	-0.0	+0.5	+1.0	+0.4