Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04316 and H281DRAFT_04317 are separated by 483 nucleotidesH281DRAFT_04317 and H281DRAFT_04318 are separated by 323 nucleotidesH281DRAFT_04318 and H281DRAFT_04319 are separated by 311 nucleotidesH281DRAFT_04319 and H281DRAFT_04320 are separated by 81 nucleotides H281DRAFT_04316: H281DRAFT_04316 - bile acid:Na+ symporter, BASS family, at 33,840 to 34,799 _04316 H281DRAFT_04317: H281DRAFT_04317 - multidrug resistance protein, MATE family, at 35,283 to 36,695 _04317 H281DRAFT_04318: H281DRAFT_04318 - ribosome-associated protein, at 37,019 to 37,237 _04318 H281DRAFT_04319: H281DRAFT_04319 - hypothetical protein, at 37,549 to 38,013 _04319 H281DRAFT_04320: H281DRAFT_04320 - hypothetical protein, at 38,095 to 38,376 _04320
Group Condition H281DRAFT_04316 H281DRAFT_04317 H281DRAFT_04318 H281DRAFT_04319 H281DRAFT_04320
carbon source propionate (C) +0.1 -0.2 -0.7 -0.1 N.D.
carbon source Gallic Acid (C) -0.2 -0.1 -0.4 -0.2 N.D.
carbon source succinate (C) -0.1 -0.1 -0.6 -0.0 N.D.
carbon source Suberic (C) +0.0 -0.1 -0.5 -0.2 N.D.
carbon source Protocatechuic Acid (C) -0.2 +0.2 -0.4 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.1 -0.2 -0.6 +0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.5 -0.1 -0.2 N.D.
carbon source Pimelic (C) -0.2 +0.1 -0.3 -0.1 N.D.
carbon source Phenylacetic (C) +0.1 -0.2 -0.4 -0.0 N.D.
carbon source propionate (C) -0.2 -0.1 -0.3 +0.1 N.D.
phage Bu1_100 -0.4 +0.1 -0.2 -0.1 N.D.
carbon source butyrate (C) -0.0 +0.2 -0.4 -0.3 N.D.
carbon source Hexanoic (C) +0.0 -0.0 -0.6 +0.2 N.D.
ecofab LB in EcoFAB_3.5mL +0.3 -0.2 -0.5 -0.1 N.D.
carbon source adipate (C) -0.1 -0.2 -0.3 +0.3 N.D.
carbon source adipate (C) +0.0 -0.2 -0.4 +0.3 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 -0.6 +0.1 +0.1 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 -0.4 +0.2 +0.1 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.0 -0.1 +0.5 -0.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 -0.1 +0.3 -0.1 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 -0.7 +0.9 +0.0 N.D.
carbon source Sebacic (C) +0.3 +0.3 -0.3 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.1 -0.1 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.3 +0.4 +0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.2 +0.4 -0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.0 +0.1 +0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.1 +0.4 +0.3 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 -0.5 +0.9 +0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 -0.1 +0.3 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.0 +0.4 +0.1 N.D.
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