Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04247 and H281DRAFT_04248 are separated by 19 nucleotidesH281DRAFT_04248 and H281DRAFT_04249 are separated by 260 nucleotidesH281DRAFT_04249 and H281DRAFT_04250 overlap by 4 nucleotidesH281DRAFT_04250 and H281DRAFT_04251 are separated by 56 nucleotides H281DRAFT_04247: H281DRAFT_04247 - aminopeptidase P Metallo peptidase. MEROPS family M24B, at 366,028 to 367,419 _04247 H281DRAFT_04248: H281DRAFT_04248 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 367,439 to 368,809 _04248 H281DRAFT_04249: H281DRAFT_04249 - tRNA-U20-dihydrouridine synthase, at 369,070 to 370,146 _04249 H281DRAFT_04250: H281DRAFT_04250 - DNA-binding protein Fis, at 370,143 to 370,376 _04250 H281DRAFT_04251: H281DRAFT_04251 - IMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase, at 370,433 to 371,998 _04251
Group Condition H281DRAFT_04247 H281DRAFT_04248 H281DRAFT_04249 H281DRAFT_04250 H281DRAFT_04251
ecofab LB in EcoFAB_3.5mL -0.3 N.D. +0.2 -1.6 N.D.
carbon source adipate (C) -0.3 N.D. -0.2 -1.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 N.D. -0.4 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 N.D. +0.0 -0.6 N.D.
carbon source Protocatechuic Acid (C) +0.2 N.D. -0.1 -0.9 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. +0.2 -0.7 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 N.D. +0.4 -0.7 N.D.
phage Bu1_10 +0.0 N.D. +0.1 -0.7 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.4 N.D. -0.7 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.4 N.D. -0.2 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.4 N.D. -0.3 +0.4 N.D.
phage Bu1_100 +0.2 N.D. +0.2 -0.6 N.D.
carbon source 2-furoic (C) -0.0 N.D. -0.2 +0.7 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. +0.6 +0.1 N.D.
carbon source D,L-Lactate (C) -0.2 N.D. +0.2 +0.5 N.D.
carbon source Phenylacetic (C) +0.1 N.D. -0.2 +0.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 N.D. -0.1 +0.8 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.2 N.D. +0.1 +0.6 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 N.D. +0.1 +0.7 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 N.D. -0.1 +0.8 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 N.D. -0.1 +0.8 N.D.
carbon source D,L-Lactate (C) -0.2 N.D. +0.1 +0.8 N.D.
carbon source 2-furoic (C) -0.2 N.D. +0.1 +0.9 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 N.D. +0.1 +0.8 N.D.
carbon source D-Glucose (C) +0.1 N.D. +0.2 +0.6 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 N.D. +0.0 +0.7 N.D.
carbon source D,L-Lactate (C) -0.1 N.D. +0.2 +0.9 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 N.D. -0.0 +0.9 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 N.D. +0.2 +1.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 N.D. +0.3 +1.5 N.D.
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