Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04221 and H281DRAFT_04222 are separated by 217 nucleotidesH281DRAFT_04222 and H281DRAFT_04223 are separated by 224 nucleotidesH281DRAFT_04223 and H281DRAFT_04224 are separated by 109 nucleotidesH281DRAFT_04224 and H281DRAFT_04225 are separated by 595 nucleotides H281DRAFT_04221: H281DRAFT_04221 - hemolysin III, at 340,383 to 341,003 _04221 H281DRAFT_04222: H281DRAFT_04222 - ATP-dependent RNA helicase RhlE, at 341,221 to 342,753 _04222 H281DRAFT_04223: H281DRAFT_04223 - hypothetical protein, at 342,978 to 343,499 _04223 H281DRAFT_04224: H281DRAFT_04224 - Fatty acid desaturase, at 343,609 to 344,436 _04224 H281DRAFT_04225: H281DRAFT_04225 - transcriptional regulator, DeoR family, at 345,032 to 345,811 _04225
Group Condition H281DRAFT_04221 H281DRAFT_04222 H281DRAFT_04223 H281DRAFT_04224 H281DRAFT_04225
carbon source Hexanoic (C) -0.1 +0.0 -0.2 -1.2 -1.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.0 -0.2 -0.2 -0.2 -2.0
carbon source succinate (C) -0.0 +0.0 -0.1 -0.3 -2.0
carbon source adipate (C) -0.1 -0.3 -0.4 -0.4 -0.9
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 +1.0 -0.0 +0.2 -3.1
carbon source Hexanoic (C) +0.2 +0.1 -0.5 -0.6 -0.9
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.0 -0.1 -0.0 -0.1 -1.5
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.2 -0.1 -0.0 -0.2 -1.2
carbon source Protocatechuic Acid (C) -0.0 +0.4 -0.3 +0.3 -2.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 +0.0 -0.1 +0.1 -1.5
carbon source Dodecandioic (C) +0.1 -0.1 -0.3 -0.2 -1.0
carbon source adipate (C) +0.1 -0.4 -0.2 -0.3 -0.7
carbon source Pimelic (C) +0.0 -0.2 -0.2 -0.5 -0.6
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 +0.9 -0.0 +0.1 -2.3
carbon source Protocatechuic Acid (C) +0.0 +0.2 -0.2 +0.0 -1.5
carbon source D,L-Lactate (C) -0.2 -0.1 -0.1 +0.2 -1.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 -0.1 -0.0 +0.1 -1.2
carbon source D-Glucose (C) +0.2 -0.2 -0.2 -0.1 -0.9
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.2 +0.1 -0.1 -1.3
carbon source 2'-Deoxyinosine 10 mM (C) +0.0 -0.2 -0.1 +0.5 -1.4
carbon source D,L-Lactate (C) +0.0 -0.1 +0.0 +0.2 -1.2
carbon source butyrate (C) -0.2 -0.1 +0.0 +0.4 -1.2
carbon source Malonic (C) -0.0 +0.3 -0.1 +0.2 -1.0
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +1.0 -0.0 -0.7 -0.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 +1.2 -0.1 +0.4 -1.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 +1.3 -0.1 +0.4 -1.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 -0.1 -0.2 +0.1 +1.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.2 +0.1 -0.3 +1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.0 -0.1 +1.0 +0.5
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.2 +0.0 +0.1 +1.5
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