Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04195 and H281DRAFT_04196 are separated by 180 nucleotidesH281DRAFT_04196 and H281DRAFT_04197 overlap by 23 nucleotidesH281DRAFT_04197 and H281DRAFT_04198 overlap by 8 nucleotidesH281DRAFT_04198 and H281DRAFT_04199 are separated by 113 nucleotides H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323 _04195 H281DRAFT_04196: H281DRAFT_04196 - SnoaL-like domain-containing protein, at 315,504 to 315,950 _04196 H281DRAFT_04197: H281DRAFT_04197 - hypothetical protein, at 315,928 to 317,103 _04197 H281DRAFT_04198: H281DRAFT_04198 - Protein of unknown function (DUF2946), at 317,096 to 317,668 _04198 H281DRAFT_04199: H281DRAFT_04199 - Putative Zn-dependent protease, contains TPR repeats, at 317,782 to 319,650 _04199
Group Condition H281DRAFT_04195 H281DRAFT_04196 H281DRAFT_04197 H281DRAFT_04198 H281DRAFT_04199
carbon source adipate (C) -1.4 -0.7 -0.8 -2.3 -0.4
carbon source adipate (C) -0.5 -0.9 -1.0 -2.3 -0.1
carbon source propionate (C) -2.7 -0.4 -0.1 -0.1 -0.1
carbon source Suberic (C) -3.0 -0.1 -0.1 +0.1 -0.0
lb LB -2.8 -0.2 -0.0 -0.1 +0.1
carbon source Valeric (C) -2.8 -0.0 +0.0 -0.1 +0.0
carbon source propionate (C) -2.6 -0.1 -0.0 +0.0 -0.1
carbon source Hexanoic (C) -0.7 -0.8 -0.3 -0.8 -0.2
carbon source Dodecandioic (C) -2.6 -0.2 +0.1 -0.1 -0.1
control NoPhageControl -3.0 +0.0 +0.2 -0.1 +0.1
carbon source D,L-Lactate (C) -2.0 -0.6 -0.2 -0.0 +0.0
carbon source propionate (C) -1.6 -0.1 -0.3 -0.1 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -2.0 -0.2 -0.2 -0.1 +0.2
carbon source Malonic (C) -0.9 -0.8 -0.3 +0.1 -0.1
carbon source butyrate (C) -0.9 -0.1 -0.4 -0.5 -0.1
carbon source Pimelic (C) -2.0 -0.1 +0.2 -0.0 -0.1
carbon source D,L-Lactate (C) -1.9 -0.0 +0.0 +0.2 -0.0
carbon source acetate (C) -1.3 -0.4 +0.1 +0.0 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) -1.5 +0.0 -0.2 +0.1 -0.0
carbon source D-Glucose (C) -1.7 -0.1 +0.1 +0.1 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.7 -0.9 -0.1 +0.1 +0.1
carbon source Azelaic (C) +0.7 -0.6 +0.4 -0.1 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +1.0 -0.3 -0.3 -0.2 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +3.1 -1.0 -0.8 -0.1 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +1.3 +0.0 +0.2 -0.4 -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +2.8 -1.0 -0.8 +0.1 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.9 +0.1 +0.1 -0.0 -0.1
phage Bu1_100 +5.2 -0.3 -0.1 +0.0 +0.4
phage Bu1_100 +5.4 -0.2 +0.3 -0.2 +0.0
phage Bu1_10 +5.2 -0.1 +0.2 +0.0 +0.2
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