Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04190 and H281DRAFT_04191 are separated by 266 nucleotidesH281DRAFT_04191 and H281DRAFT_04192 overlap by 4 nucleotidesH281DRAFT_04192 and H281DRAFT_04193 are separated by 283 nucleotidesH281DRAFT_04193 and H281DRAFT_04194 are separated by 90 nucleotides H281DRAFT_04190: H281DRAFT_04190 - phosphoglycerate kinase, at 309,950 to 311,143 _04190 H281DRAFT_04191: H281DRAFT_04191 - Branched-chain amino acid transport protein, at 311,410 to 311,733 _04191 H281DRAFT_04192: H281DRAFT_04192 - Predicted branched-chain amino acid permease (azaleucine resistance), at 311,730 to 312,476 _04192 H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683 _04193 H281DRAFT_04194: H281DRAFT_04194 - Uncharacterized conserved protein, contains Zn-finger domain, at 313,774 to 313,968 _04194
Group Condition H281DRAFT_04190 H281DRAFT_04191 H281DRAFT_04192 H281DRAFT_04193 H281DRAFT_04194
carbon source p-Coumaric (C) N.D. -2.1 -1.6 -0.1 N.D.
carbon source Phenylacetic (C) N.D. -1.9 -1.4 -0.3 N.D.
carbon source p-Coumaric (C) N.D. -1.7 -1.6 -0.1 N.D.
carbon source Phenylacetic (C) N.D. -1.4 -1.5 -0.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -1.2 -1.3 -0.2 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -1.5 -1.3 +0.0 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -1.4 -1.2 -0.1 N.D.
carbon source Hydroxy-L-Proline (C) N.D. -1.4 -1.1 -0.2 N.D.
carbon source Protocatechuic Acid (C) N.D. -1.2 -1.1 -0.3 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -1.5 -1.2 +0.1 N.D.
carbon source Protocatechuic Acid (C) N.D. -1.1 -1.2 -0.3 N.D.
carbon source Protocatechuic Acid (C) N.D. -1.1 -1.3 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 -1.1 -0.8 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -1.3 -1.0 -0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -1.2 -1.2 +0.1 N.D.
carbon source Gallic Acid (C) N.D. -1.1 -0.9 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.0 -1.1 +0.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.6 -1.1 -0.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.9 -1.1 +0.1 N.D.
carbon source Protocatechuic Acid (C) N.D. -0.8 -0.9 -0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -1.0 -0.8 +0.0 N.D.
carbon source Gallic Acid (C) N.D. -1.1 -0.3 -0.1 N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 -0.4 -0.3 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.5 -0.4 -0.4 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -1.1 +0.0 -0.2 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.7 -0.3 -0.2 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.5 -0.4 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.4 -0.6 -0.2 N.D.
carbon source Hexanoic (C) N.D. +0.2 -0.1 -0.8 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.6 -0.2 +0.3 N.D.
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