Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04189 and H281DRAFT_04190 are separated by 505 nucleotidesH281DRAFT_04190 and H281DRAFT_04191 are separated by 266 nucleotidesH281DRAFT_04191 and H281DRAFT_04192 overlap by 4 nucleotidesH281DRAFT_04192 and H281DRAFT_04193 are separated by 283 nucleotides H281DRAFT_04189: H281DRAFT_04189 - pyruvate kinase, at 308,008 to 309,444 _04189 H281DRAFT_04190: H281DRAFT_04190 - phosphoglycerate kinase, at 309,950 to 311,143 _04190 H281DRAFT_04191: H281DRAFT_04191 - Branched-chain amino acid transport protein, at 311,410 to 311,733 _04191 H281DRAFT_04192: H281DRAFT_04192 - Predicted branched-chain amino acid permease (azaleucine resistance), at 311,730 to 312,476 _04192 H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683 _04193
Group Condition H281DRAFT_04189 H281DRAFT_04190 H281DRAFT_04191 H281DRAFT_04192 H281DRAFT_04193
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.6 N.D. -1.4 -1.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -1.6 N.D. -0.6 -1.1 -0.8
carbon source p-Coumaric (C) -0.1 N.D. -2.1 -1.6 -0.1
carbon source Phenylacetic (C) -0.5 N.D. -1.4 -1.5 -0.5
carbon source Phenylacetic (C) -0.2 N.D. -1.9 -1.4 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.9 N.D. -1.2 -1.3 -0.2
carbon source p-Coumaric (C) -0.1 N.D. -1.7 -1.6 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 N.D. -1.5 -1.3 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.8 N.D. -1.5 -1.2 +0.1
carbon source 2-Deoxy-D-Ribose (C) -1.1 N.D. -1.0 -1.1 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 N.D. -1.3 -1.0 -0.1
carbon source 2-Deoxy-D-Ribose (C) -1.1 N.D. -0.9 -1.1 +0.1
carbon source Protocatechuic Acid (C) -0.5 N.D. -1.1 -1.3 -0.2
carbon source Protocatechuic Acid (C) -0.4 N.D. -1.1 -1.2 -0.3
carbon source Hydroxy-L-Proline (C) -0.2 N.D. -1.4 -1.1 -0.2
carbon source Protocatechuic Acid (C) -0.3 N.D. -1.2 -1.1 -0.3
carbon source 2'-Deoxyinosine 10 mM (C) -0.5 N.D. -1.2 -1.2 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.7 N.D. -1.0 -0.8 +0.0
carbon source Gallic Acid (C) -0.1 N.D. -1.1 -0.9 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 N.D. -0.6 -1.1 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.1 N.D. -0.5 -0.5 -0.0
carbon source Protocatechuic Acid (C) -0.2 N.D. -0.8 -0.9 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.0 N.D. +0.0 +0.0 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 N.D. -1.1 +0.0 -0.2
carbon source Glycerol (C) -1.5 N.D. -0.2 -0.0 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.9 N.D. -0.3 -0.5 -0.1
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.0 N.D. -0.7 -0.3 -0.2
carbon source Hexanoic (C) +0.8 N.D. +0.2 -0.1 -0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +1.2 N.D. -0.5 -0.0 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +1.2 N.D. +0.1 -0.2 -0.2
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