Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04174 and H281DRAFT_04175 are separated by 237 nucleotidesH281DRAFT_04175 and H281DRAFT_04176 are separated by 30 nucleotidesH281DRAFT_04176 and H281DRAFT_04177 are separated by 128 nucleotidesH281DRAFT_04177 and H281DRAFT_04178 are separated by 256 nucleotides H281DRAFT_04174: H281DRAFT_04174 - Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain, at 291,013 to 292,020 _04174 H281DRAFT_04175: H281DRAFT_04175 - Carbon monoxide dehydrogenase subunit G, at 292,258 to 292,992 _04175 H281DRAFT_04176: H281DRAFT_04176 - Uncharacterized conserved protein, DUF427 family, at 293,023 to 293,415 _04176 H281DRAFT_04177: H281DRAFT_04177 - hypothetical protein, at 293,544 to 294,041 _04177 H281DRAFT_04178: H281DRAFT_04178 - serine protease Do, at 294,298 to 295,818 _04178
Group Condition H281DRAFT_04174 H281DRAFT_04175 H281DRAFT_04176 H281DRAFT_04177 H281DRAFT_04178
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 -0.5 +0.2 -1.0 -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.3 -0.2 -0.2 -1.5
carbon source adipate (C) +0.1 -0.6 -0.2 -0.6 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.1 -0.2 -0.3 -1.0
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 -0.5 +0.0 -0.6 -0.4
carbon source Malonic (C) -0.3 +0.5 -0.8 -0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.1 -0.1 -0.2 -0.9
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 -0.2 +0.0 -0.5 -0.7
phage Bu1_100 -0.2 -0.8 -0.4 +0.5 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.3 -0.2 +0.2 -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.3 +0.1 +0.2 -0.9
carbon source Phenylacetic (C) +0.0 +0.3 -0.3 +0.1 -0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 +0.3 -0.2 -0.3 -0.4
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 +0.0 +0.3 -0.5 -0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.3 -0.4 +0.1 -0.4 -0.2
carbon source adipate (C) -0.0 -0.3 -0.1 +0.4 -0.6
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.4 +0.0 +0.3 -0.4 -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.8 -0.5 +0.4 -1.0
carbon source propionate (C) -0.1 +0.5 +0.1 -0.3 -0.5
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 -0.3 +0.6 -0.1 -0.4
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 +0.1 +0.7 -0.5 -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 +0.7 +0.1 +0.4 -1.0
ecofab LB in EcoFAB_3.5mL -0.1 +0.7 +0.2 -0.3 -0.3
carbon source D-Glucose (C) -0.1 +0.0 -0.0 -0.4 +0.8
phage Bu1_10 +0.2 +0.7 +0.0 -0.4 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.3 +0.3 +0.3 +0.4
carbon source D-Glucose (C) -0.1 +0.2 +0.3 +0.1 +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 +0.5 +0.4 +0.1 +0.5
carbon source Hexanoic (C) +0.1 +0.8 +0.2 +0.1 +0.3
carbon source Azelaic (C) -0.0 +0.5 +0.3 +0.4 +0.3
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