Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04169 and H281DRAFT_04170 are separated by 1 nucleotidesH281DRAFT_04170 and H281DRAFT_04171 are separated by 18 nucleotidesH281DRAFT_04171 and H281DRAFT_04172 are separated by 425 nucleotidesH281DRAFT_04172 and H281DRAFT_04173 are separated by 219 nucleotides H281DRAFT_04169: H281DRAFT_04169 - outer membrane protein, multidrug efflux system, at 282,922 to 284,451 _04169 H281DRAFT_04170: H281DRAFT_04170 - multidrug efflux pump, at 284,453 to 287,674 _04170 H281DRAFT_04171: H281DRAFT_04171 - membrane fusion protein, multidrug efflux system, at 287,693 to 288,925 _04171 H281DRAFT_04172: H281DRAFT_04172 - transcriptional regulator, TetR family, at 289,351 to 289,989 _04172 H281DRAFT_04173: H281DRAFT_04173 - Nicotinamidase-related amidase, at 290,209 to 290,835 _04173
Group Condition H281DRAFT_04169 H281DRAFT_04170 H281DRAFT_04171 H281DRAFT_04172 H281DRAFT_04173
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -4.3 -4.0 -6.4 +2.1 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -3.7 -4.5 -5.6 +1.8 +0.0
carbon source p-Coumaric (C) -2.2 -2.6 -2.8 +0.1 -0.3
carbon source p-Coumaric (C) -2.3 -2.7 -2.2 +0.2 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 +0.7 +0.8 -6.4 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.4 +0.4 -5.7 +0.2
carbon source Protocatechuic Acid (C) +0.4 +0.3 +0.3 -5.5 -0.1
carbon source Protocatechuic Acid (C) +0.8 +0.9 +0.8 -6.7 -0.2
carbon source Hexanoic (C) +0.8 +0.9 +0.8 -6.2 -0.3
carbon source Azelaic (C) +0.7 +0.6 +0.8 -5.9 -0.2
phage Bu1_100 -0.7 -1.0 -1.1 -0.9 -0.3
phage Bu1_10 -0.7 -1.3 -1.9 -0.4 +0.3
carbon source butyrate (C) -0.3 -0.2 +0.2 -2.3 -0.7
carbon source Valeric (C) +0.4 +0.1 -0.1 -2.8 -0.6
carbon source Protocatechuic Acid (C) -0.1 +0.2 +0.3 -3.3 -0.0
carbon source propionate (C) -0.0 +0.4 +0.1 -3.2 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 +0.8 +0.7 -3.5 -0.2
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 +0.3 +0.4 -2.8 -0.3
carbon source Dodecandioic (C) +0.4 +0.6 +0.7 -3.4 -0.1
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 +0.4 +0.4 -2.9 -0.1
carbon source Suberic (C) +0.3 +0.5 +0.3 -2.8 -0.1
carbon source Phenylacetic (C) +1.3 +1.4 +1.4 -5.5 -0.2
carbon source Hexanoic (C) +0.8 +0.7 +0.8 -3.5 -0.2
carbon source Protocatechuic Acid (C) +0.4 +0.4 +0.8 -2.2 -0.3
carbon source Pimelic (C) +0.5 +0.5 +0.6 -2.1 -0.1
carbon source Sebacic (C) +0.9 +1.0 +1.0 -1.6 -0.4
carbon source Phenylacetic (C) +1.7 +2.0 +1.9 -3.8 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +3.1 +3.4 +3.4 -4.5 +0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.5 +3.9 +4.0 +3.1 -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.5 +4.1 +4.0 +3.2 -0.0
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