Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_04113 and H281DRAFT_04114 are separated by 171 nucleotidesH281DRAFT_04114 and H281DRAFT_04115 are separated by 114 nucleotidesH281DRAFT_04115 and H281DRAFT_04116 are separated by 5 nucleotidesH281DRAFT_04116 and H281DRAFT_04117 are separated by 504 nucleotides H281DRAFT_04113: H281DRAFT_04113 - Adenylate kinase, at 223,942 to 224,607 _04113 H281DRAFT_04114: H281DRAFT_04114 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 224,779 to 225,537 _04114 H281DRAFT_04115: H281DRAFT_04115 - Regulator of sirC expression, contains transglutaminase-like and TPR domains, at 225,652 to 226,494 _04115 H281DRAFT_04116: H281DRAFT_04116 - putative peptidoglycan lipid II flippase, at 226,500 to 228,050 _04116 H281DRAFT_04117: H281DRAFT_04117 - SSU ribosomal protein S20P, at 228,555 to 228,833 _04117
Group Condition H281DRAFT_04113 H281DRAFT_04114 H281DRAFT_04115 H281DRAFT_04116 H281DRAFT_04117
carbon source butyrate (C) N.D. -0.7 -0.1 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.5 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 -0.4 N.D. N.D.
carbon source Hydroxy-L-Proline (C) N.D. -0.5 -0.2 N.D. N.D.
carbon source propionate (C) N.D. -0.6 -0.0 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 -0.4 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.2 -0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.3 -0.5 N.D. N.D.
carbon source propionate (C) N.D. -0.3 +0.3 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.4 -0.3 N.D. N.D.
carbon source Hexanoic (C) N.D. -0.6 +0.7 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 -0.2 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.4 -0.2 N.D. N.D.
carbon source Phenylacetic (C) N.D. -0.4 +0.6 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. +0.5 -0.2 N.D. N.D.
carbon source Hexanoic (C) N.D. -0.1 +0.4 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +0.6 -0.2 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.6 -0.2 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.3 +0.2 N.D. N.D.
carbon source 2-furoic (C) N.D. +0.2 +0.3 N.D. N.D.
carbon source Malonic (C) N.D. -0.1 +0.7 N.D. N.D.
carbon source Sebacic (C) N.D. +0.1 +0.5 N.D. N.D.
carbon source Protocatechuic Acid (C) N.D. +0.3 +0.3 N.D. N.D.
carbon source acetate (C) N.D. +0.5 +0.2 N.D. N.D.
carbon source Suberic (C) N.D. +0.2 +0.5 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.8 -0.1 N.D. N.D.
carbon source Protocatechuic Acid (C) N.D. +0.4 +0.4 N.D. N.D.
carbon source Pimelic (C) N.D. +0.6 +0.3 N.D. N.D.
carbon source Azelaic (C) N.D. +0.5 +0.4 N.D. N.D.
carbon source Malonic (C) N.D. +0.4 +0.8 N.D. N.D.
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