Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_04062	H281DRAFT_04063	H281DRAFT_04064	H281DRAFT_04065	H281DRAFT_04066
carbon source	adipate (C)	-0.9	+0.0	-3.1	N.D.	+0.0
carbon source	Hydroxy-L-Proline (C)	-2.0	-1.4	-0.2	N.D.	-0.2
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2	-0.3	-1.8	N.D.	+0.1
carbon source	adipate (C)	-0.6	+0.1	-2.2	N.D.	-0.3
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	-0.5	-1.5	N.D.	+0.2
carbon source	Dodecandioic (C)	-0.3	-0.0	-2.4	N.D.	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	-0.0	-2.2	N.D.	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.8	-0.1	-1.8	N.D.	+0.1
control	NoPhageControl	-0.4	-0.0	-2.2	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	-0.1	-1.6	N.D.	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.2	-0.2	-1.4	N.D.	-0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.4	-0.2	-1.4	N.D.	-0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-1.1	-0.0	-1.2	N.D.	+0.3
ecofab	LB in EcoFAB_3.5mL	+0.0	-0.2	-1.8	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	-0.2	-1.5	N.D.	+0.2
lb	LB	-0.2	-0.1	-1.6	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.1	-1.6	N.D.	+0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	+0.2	-0.1	-1.9	N.D.	-0.1
carbon source	D-Glucose (C)	-0.3	-0.0	-1.3	N.D.	-0.2
carbon source	L-Glutamic (C)	-0.5	-0.1	-1.1	N.D.	-0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.5	-0.2	-1.2	N.D.	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.2	-1.1	N.D.	+0.1
carbon source	2-Deoxy-D-Ribose (C)	+0.2	+0.0	-2.0	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.1	-1.4	N.D.	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	+0.3	-1.7	N.D.	-0.0
carbon source	D-Glucose (C)	+0.1	+0.0	-1.6	N.D.	+0.2
carbon source	Sebacic (C)	-0.2	+0.4	-1.5	N.D.	+0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.6	-0.1	-1.2	N.D.	-0.1
carbon source	Phenylacetic (C)	+0.4	-0.1	+1.6	N.D.	-0.1
carbon source	4-Hydroxybenzoic Acid (C)	-0.5	-0.0	+3.1	N.D.	+0.1