Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03997 and H281DRAFT_03998 are separated by 546 nucleotidesH281DRAFT_03998 and H281DRAFT_03999 are separated by 572 nucleotidesH281DRAFT_03999 and H281DRAFT_04000 are separated by 99 nucleotidesH281DRAFT_04000 and H281DRAFT_04001 are separated by 69 nucleotides H281DRAFT_03997: H281DRAFT_03997 - DNA polymerase-3 subunit epsilon, at 101,333 to 102,484 _03997 H281DRAFT_03998: H281DRAFT_03998 - hypothetical protein, at 103,031 to 103,279 _03998 H281DRAFT_03999: H281DRAFT_03999 - porin, GBP family, at 103,852 to 104,997 _03999 H281DRAFT_04000: H281DRAFT_04000 - transcription elongation factor GreB, at 105,097 to 105,717 _04000 H281DRAFT_04001: H281DRAFT_04001 - tRNA_Arg_ACG, at 105,787 to 105,863 _04001
Group Condition H281DRAFT_03997 H281DRAFT_03998 H281DRAFT_03999 H281DRAFT_04000 H281DRAFT_04001
phage Bu1_10 -0.1 -0.2 -3.2 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.3 -1.0 -1.2 N.D.
phage Bu1_100 +0.1 +0.3 -3.0 +0.5 N.D.
phage Bu1_100 -0.0 +0.3 -2.7 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.0 -0.5 -1.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.1 -1.1 -0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.0 -0.7 -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.0 -0.6 -0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.2 -0.4 -0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.1 -0.5 -1.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.1 -0.5 -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.1 -0.3 -0.9 N.D.
carbon source Hexanoic (C) -0.2 -0.6 -0.3 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.1 -0.5 -0.1 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 +0.2 -0.8 -0.1 N.D.
carbon source Hexanoic (C) -0.2 -0.1 -0.6 +0.3 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 +0.1 -1.0 +0.2 N.D.
carbon source Hydroxy-L-Proline (C) -0.1 -0.4 -0.2 +0.2 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.2 -0.7 -0.1 N.D.
carbon source Phenylacetic (C) -0.0 +0.4 -0.9 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.5 -0.3 +0.2 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 -0.1 -0.4 +0.4 N.D.
carbon source Phenylacetic (C) +0.0 +0.3 -0.7 +0.1 N.D.
carbon source propionate (C) +0.0 +0.2 -0.5 +0.0 N.D.
carbon source succinate (C) +0.0 +0.5 -0.1 -0.3 N.D.
carbon source Protocatechuic Acid (C) +0.1 +0.4 -0.3 -0.0 N.D.
carbon source Protocatechuic Acid (C) +0.2 +0.2 -0.4 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.1 -0.1 +0.5 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 +0.1 +0.4 +0.1 N.D.
ecofab LB in EcoFAB_3.5mL +0.0 +0.2 +0.9 -0.0 N.D.
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