Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03988 and H281DRAFT_03989 are separated by 201 nucleotidesH281DRAFT_03989 and H281DRAFT_03990 overlap by 26 nucleotidesH281DRAFT_03990 and H281DRAFT_03991 are separated by 131 nucleotidesH281DRAFT_03991 and H281DRAFT_03992 are separated by 54 nucleotides H281DRAFT_03988: H281DRAFT_03988 - alanyl aminopeptidase. Metallo peptidase. MEROPS family M01, at 94,204 to 96,978 _03988 H281DRAFT_03989: H281DRAFT_03989 - proteic killer suppression protein, at 97,180 to 97,461 _03989 H281DRAFT_03990: H281DRAFT_03990 - addiction module antidote protein, HigA family, at 97,436 to 97,933 _03990 H281DRAFT_03991: H281DRAFT_03991 - D-fructose 1,6-bisphosphatase, at 98,065 to 99,081 _03991 H281DRAFT_03992: H281DRAFT_03992 - tRNA_Thr_CGT, at 99,136 to 99,211 _03992
Group Condition H281DRAFT_03988 H281DRAFT_03989 H281DRAFT_03990 H281DRAFT_03991 H281DRAFT_03992
carbon source Malonic (C) -0.2 -1.3 -0.4 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 -0.7 -1.4 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.0 -0.7 -0.0 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.9 +0.0 +0.3 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.7 -0.2 +0.5 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -1.0 -0.6 +0.1 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.0 +0.2 -0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.5 -0.7 N.D. N.D.
carbon source Phenylacetic (C) -0.6 -0.1 -0.4 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.9 -0.2 -0.0 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 -0.7 +0.4 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -0.4 +0.4 N.D. N.D.
carbon source Protocatechuic Acid (C) -0.8 -0.8 +0.6 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -0.3 +0.4 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 -0.8 +0.2 N.D. N.D.
carbon source Phenylacetic (C) -0.6 +0.5 -0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.7 -0.2 +0.2 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -1.0 -0.3 +0.7 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.9 -0.2 +0.5 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -1.0 -0.0 +0.6 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.5 -0.5 -0.3 N.D. N.D.
carbon source adipate (C) -0.3 -0.5 +0.6 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.7 -0.3 +0.7 N.D. N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -0.4 +0.6 N.D. N.D.
carbon source D-Glucose (C) -0.3 -0.5 +0.6 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.1 +0.6 -0.8 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 +0.6 -0.6 N.D. N.D.
carbon source Hexanoic (C) -0.1 -0.4 +0.7 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.9 -0.5 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 +1.1 -0.4 N.D. N.D.
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