Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03946 and H281DRAFT_03947 are separated by 87 nucleotidesH281DRAFT_03947 and H281DRAFT_03948 are separated by 112 nucleotidesH281DRAFT_03948 and H281DRAFT_03949 are separated by 298 nucleotidesH281DRAFT_03949 and H281DRAFT_03950 overlap by 47 nucleotides H281DRAFT_03946: H281DRAFT_03946 - transcriptional regulator, ArsR family, at 48,379 to 48,747 _03946 H281DRAFT_03947: H281DRAFT_03947 - Tetratricopeptide repeat-containing protein, at 48,835 to 50,718 _03947 H281DRAFT_03948: H281DRAFT_03948 - metabolite-proton symporter, at 50,831 to 52,132 _03948 H281DRAFT_03949: H281DRAFT_03949 - Ribosomal protein S18 acetylase RimI, at 52,431 to 52,976 _03949 H281DRAFT_03950: H281DRAFT_03950 - hypothetical protein, at 52,930 to 53,124 _03950
Group Condition H281DRAFT_03946 H281DRAFT_03947 H281DRAFT_03948 H281DRAFT_03949 H281DRAFT_03950
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -1.6 +0.2 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.2 -0.1 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.4 +0.2 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.4 -0.0 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.4 +0.0 -0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -2.0 +0.1 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -1.1 -0.0 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.4 -0.0 -0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.7 -0.0 -0.4 N.D.
carbon source D-Glucose (C) -0.9 -0.4 +0.1 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.0 +0.0 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 -0.2 +0.1 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -1.3 -0.1 +0.2 -0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -0.6 -0.1 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.8 +0.1 -0.3 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.6 -0.5 +0.1 -0.1 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.0 +0.1 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.0 +0.1 +0.1 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 -0.2 +0.2 -0.0 N.D.
ecofab LB in EcoFAB_3.5mL -0.6 -0.1 -0.3 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 -0.3 +0.3 -0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.2 +0.7 +0.2 +0.0 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.7 +0.3 +0.2 +0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 -0.7 +0.2 +0.3 N.D.
carbon source butyrate (C) +0.9 +0.2 -0.1 +0.1 N.D.
carbon source Pimelic (C) +0.5 +0.0 +0.2 +0.5 N.D.
carbon source Malonic (C) +0.7 +0.4 -0.0 +0.3 N.D.
carbon source Hexanoic (C) +0.4 +0.4 +0.2 +0.4 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 +2.7 -0.7 -0.1 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 +2.7 -0.5 +0.6 N.D.
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