Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_03891 and H281DRAFT_03892 are separated by 11 nucleotidesH281DRAFT_03892 and H281DRAFT_03893 are separated by 152 nucleotidesH281DRAFT_03893 and H281DRAFT_03894 are separated by 245 nucleotidesH281DRAFT_03894 and H281DRAFT_03895 are separated by 527 nucleotides H281DRAFT_03891: H281DRAFT_03891 - Probable cobalt transporter subunit (CbtB), at 422,898 to 423,119 _03891 H281DRAFT_03892: H281DRAFT_03892 - Uncharacterized membrane protein, predicted cobalt tansporter CbtA, at 423,131 to 423,925 _03892 H281DRAFT_03893: H281DRAFT_03893 - hypothetical protein, at 424,078 to 424,905 _03893 H281DRAFT_03894: H281DRAFT_03894 - 3-methylfumaryl-CoA hydratase, at 425,151 to 425,993 _03894 H281DRAFT_03895: H281DRAFT_03895 - Uncharacterized conserved protein YfaA, DUF2138 family, at 426,521 to 428,323 _03895
Group Condition H281DRAFT_03891 H281DRAFT_03892 H281DRAFT_03893 H281DRAFT_03894 H281DRAFT_03895
carbon source Sebacic (C) -0.6 -0.4 +0.1 -0.2 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.1 -0.3 +0.2 -0.5 +0.1
ecofab LB in EcoFAB_3.5mL -0.3 -0.3 +0.0 -0.3 +0.2
carbon source butyrate (C) -0.3 -0.3 -0.1 +0.2 -0.1
control NoPhageControl -0.4 +0.3 +0.1 -0.4 +0.0
carbon source D-Glucose (C) -0.4 +0.2 -0.1 +0.4 -0.2
phage Bu1_100 -0.3 +0.2 -0.1 +0.5 -0.3
phage Bu1_100 +0.1 +0.4 -0.4 +0.2 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.3 -0.2 -0.1 +0.4
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 +0.3 +0.0 -0.4 +0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 +0.3 +0.2 -0.3 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +0.5 -0.2 -0.1 -0.1
carbon source adipate (C) -0.2 -0.1 +0.3 +0.5 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.6 -0.0 -0.3 +0.0
carbon source Phenylacetic (C) +0.0 +0.4 +0.3 -0.2 +0.2
carbon source Protocatechuic Acid (C) +0.4 +0.5 +0.2 -0.3 -0.0
carbon source 3-hydroxybutyric (C) +0.3 +0.3 +0.2 -0.1 +0.1
carbon source D-Glucose (C) +0.4 -0.1 +0.1 +0.4 +0.1
carbon source Valeric (C) +0.3 +0.2 +0.4 -0.0 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.5 -0.0 +0.3 +0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.2 +0.2 +0.1 +0.5 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +0.6 -0.1 -0.2 +0.2
carbon source 2-furoic (C) +0.1 +0.6 +0.3 -0.0 +0.0
carbon source D,L-Lactate (C) +0.5 +0.3 -0.1 +0.1 +0.3
carbon source butyrate (C) +0.5 +0.1 +0.1 +0.3 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.5 +0.5 -0.0 +0.6 -0.2
carbon source D-Glucose (C) +0.3 +0.4 +0.2 +0.3 +0.1
carbon source Malonic (C) +0.3 +0.5 +0.2 +0.2 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 +0.6 +0.3 +0.2 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 +0.6 +0.2 +0.2 +0.2
remove
H281DRAFT_03891
plot		 remove
H281DRAFT_03892
plot		 remove
H281DRAFT_03893		 remove
H281DRAFT_03894
plot		 remove
H281DRAFT_03895
plot