Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03890 and H281DRAFT_03891 are separated by 216 nucleotidesH281DRAFT_03891 and H281DRAFT_03892 are separated by 11 nucleotidesH281DRAFT_03892 and H281DRAFT_03893 are separated by 152 nucleotidesH281DRAFT_03893 and H281DRAFT_03894 are separated by 245 nucleotides H281DRAFT_03890: H281DRAFT_03890 - Broad specificity phosphatase PhoE, at 422,091 to 422,681 _03890 H281DRAFT_03891: H281DRAFT_03891 - Probable cobalt transporter subunit (CbtB), at 422,898 to 423,119 _03891 H281DRAFT_03892: H281DRAFT_03892 - Uncharacterized membrane protein, predicted cobalt tansporter CbtA, at 423,131 to 423,925 _03892 H281DRAFT_03893: H281DRAFT_03893 - hypothetical protein, at 424,078 to 424,905 _03893 H281DRAFT_03894: H281DRAFT_03894 - 3-methylfumaryl-CoA hydratase, at 425,151 to 425,993 _03894
Group Condition H281DRAFT_03890 H281DRAFT_03891 H281DRAFT_03892 H281DRAFT_03893 H281DRAFT_03894
carbon source Hexanoic (C) -4.2 -0.6 -0.1 -0.0 +0.1
ecofab LB in EcoFAB_3.5mL -1.5 -0.3 -0.3 +0.0 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.2 -0.4 -0.2 +0.1 +0.0
carbon source 2-Deoxy-D-Ribose 20 mM (C) -1.3 -0.0 -0.1 +0.1 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -1.3 +0.0 +0.1 +0.0 -0.1
control NoPhageControl -0.9 -0.4 +0.3 +0.1 -0.4
carbon source butyrate (C) -0.6 -0.3 -0.3 -0.1 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 -0.1 -0.3 +0.2 -0.5
carbon source D,L-Lactate (C) -0.9 -0.0 -0.2 -0.1 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.3 +0.2 +0.3 +0.2 -0.3
carbon source adipate (C) -0.8 -0.0 -0.3 +0.3 +0.0
carbon source Sebacic (C) +0.6 -0.6 -0.4 +0.1 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 +0.3 +0.3 +0.0 -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 +0.4 +0.5 -0.2 -0.1
carbon source 4-Methyl-2-oxopentanoic (C) -0.7 +0.2 +0.2 +0.2 +0.1
carbon source 3-hydroxybutyric (C) -0.6 +0.3 +0.3 +0.2 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 +0.3 +0.6 -0.0 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -1.1 +0.5 +0.6 +0.2 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.8 +0.3 -0.0 -0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 -0.2 +0.3 -0.2 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 +0.4 +0.6 +0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 +0.5 +0.6 -0.1 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.7 +0.5 +0.5 -0.0 +0.6
carbon source Protocatechuic Acid (C) +0.3 +0.4 +0.5 +0.2 -0.3
carbon source adipate (C) +0.8 -0.2 -0.1 +0.3 +0.5
carbon source Malonic (C) +1.1 +0.2 -0.0 +0.1 -0.1
carbon source D-Glucose (C) +0.4 +0.4 -0.1 +0.1 +0.4
carbon source 3-Hydroxypropionate (C) +0.6 +0.4 +0.2 +0.2 -0.1
carbon source acetate (C) +0.7 +0.2 +0.2 +0.1 +0.3
carbon source D,L-Lactate (C) +1.1 +0.5 +0.3 -0.1 +0.1
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