Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03857 and H281DRAFT_03858 are separated by 216 nucleotidesH281DRAFT_03858 and H281DRAFT_03859 are separated by 219 nucleotidesH281DRAFT_03859 and H281DRAFT_03860 are separated by 581 nucleotidesH281DRAFT_03860 and H281DRAFT_03861 are separated by 289 nucleotides H281DRAFT_03857: H281DRAFT_03857 - MFS transporter, ACS family, D-galactonate transporter, at 385,813 to 387,129 _03857 H281DRAFT_03858: H281DRAFT_03858 - DNA-binding transcriptional regulator, LysR family, at 387,346 to 388,260 _03858 H281DRAFT_03859: H281DRAFT_03859 - hypothetical protein, at 388,480 to 389,343 _03859 H281DRAFT_03860: H281DRAFT_03860 - hypothetical protein, at 389,925 to 390,149 _03860 H281DRAFT_03861: H281DRAFT_03861 - cold-shock DNA-binding protein family, at 390,439 to 390,642 _03861
Group Condition H281DRAFT_03857 H281DRAFT_03858 H281DRAFT_03859 H281DRAFT_03860 H281DRAFT_03861
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 -0.4 -0.3 -0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.2 -0.1 -0.6 N.D.
lb LB -0.2 -0.6 -0.0 -0.4 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 +0.3 -1.1 -0.2 N.D.
carbon source D-Glucose (C) -0.2 -0.4 +0.4 -0.6 N.D.
carbon source Dodecandioic (C) -0.4 -0.1 -0.4 +0.3 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.2 -0.2 -0.2 -0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 +0.4 -0.4 -0.4 N.D.
carbon source Valeric (C) -0.2 -0.4 +0.4 +0.2 N.D.
carbon source Hexanoic (C) -0.2 +0.2 +0.6 -0.6 N.D.
carbon source Gallic Acid (C) -0.0 +0.2 -0.6 +0.6 N.D.
carbon source Malonic (C) -0.3 +0.0 +0.4 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.1 +0.6 -0.2 N.D.
carbon source 3-hydroxybutyric (C) +0.2 +0.3 +0.2 -0.3 N.D.
carbon source Protocatechuic Acid (C) -0.2 -0.3 +0.5 +0.6 N.D.
carbon source 2-furoic (C) +0.3 +0.3 -0.3 +0.4 N.D.
phage Bu1_10 -0.4 +0.2 +0.2 +0.6 N.D.
carbon source Valeric (C) -0.2 +0.0 +0.5 +0.3 N.D.
phage Bu1_100 -0.2 +0.2 +0.1 +0.6 N.D.
carbon source propionate (C) +0.3 +0.1 +0.5 -0.1 N.D.
carbon source adipate (C) -0.2 +0.4 +0.2 +0.4 N.D.
carbon source Malonic (C) -0.1 +0.3 +0.5 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.1 +0.7 -0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.7 -0.2 +0.3 +0.2 N.D.
carbon source D-Glucose (C) +0.4 +0.5 +0.4 -0.2 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 +0.3 +0.6 +0.4 N.D.
carbon source D-Galactose (C) +0.5 -0.1 +0.3 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.3 +0.1 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.1 +0.9 -0.1 N.D.
carbon source succinate (C) -0.0 +0.6 +0.6 +0.6 N.D.
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