Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03832 and H281DRAFT_03834 are separated by 361 nucleotidesH281DRAFT_03834 and H281DRAFT_03835 are separated by 33 nucleotidesH281DRAFT_03835 and H281DRAFT_03836 overlap by 4 nucleotidesH281DRAFT_03836 and H281DRAFT_03837 are separated by 12 nucleotides H281DRAFT_03832: H281DRAFT_03832 - tRNA_Lys_TTT, at 360,643 to 360,718 _03832 H281DRAFT_03834: H281DRAFT_03834 - NitT/TauT family transport system substrate-binding protein, at 361,080 to 362,150 _03834 H281DRAFT_03835: H281DRAFT_03835 - NitT/TauT family transport system permease protein, at 362,184 to 362,999 _03835 H281DRAFT_03836: H281DRAFT_03836 - NitT/TauT family transport system ATP-binding protein, at 362,996 to 363,787 _03836 H281DRAFT_03837: H281DRAFT_03837 - hypothetical protein, at 363,800 to 364,504 _03837
Group Condition H281DRAFT_03832 H281DRAFT_03834 H281DRAFT_03835 H281DRAFT_03836 H281DRAFT_03837
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -1.7 -0.8 -0.5 -1.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.6 -0.1 -1.2 -0.0
carbon source Dodecandioic (C) N.D. -1.8 -0.5 +0.5 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.5 -0.5 -0.9 +0.2
carbon source Valeric (C) N.D. -0.9 -0.3 -0.3 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.9 -0.1 -0.8 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.8 -0.7 -0.7 +0.9
ecofab LB in EcoFAB_3.5mL N.D. -0.5 -0.4 -0.9 +0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -0.8 -0.1 -0.6 +0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.7 +0.1 -1.0 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.1 -1.9 -0.3 +0.9
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.5 -0.2 -0.7 +0.5
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.6 +0.1 -0.8 -0.3
carbon source Valeric (C) N.D. -0.7 -0.5 +0.5 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.6 +0.2 -0.7 +0.7
carbon source Sebacic (C) N.D. -0.6 +0.9 -0.5 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.6 -0.8 +0.9 +0.3
carbon source D-Glucose (C) N.D. -0.9 +0.4 -0.2 +0.7
carbon source p-Coumaric (C) N.D. -0.6 +0.4 -0.5 +0.8
carbon source D-Glucose (C) N.D. +0.2 -0.9 +0.5 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.6 +0.6 -0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.5 +0.5 -0.2 +0.5
carbon source D,L-Lactate (C) N.D. +0.5 -0.4 +0.7 +0.2
lb LB N.D. +0.6 -0.3 +0.6 +0.3
carbon source 3-Hydroxypropionate (C) N.D. +0.1 +1.1 -0.2 +0.6
carbon source D-Glucose (C) N.D. +0.3 +0.3 +0.6 +0.4
carbon source Malonic (C) N.D. +0.0 +1.0 +0.2 +0.4
phage Bu1_10 N.D. +0.8 +0.5 -0.7 +1.1
phage Bu1_100 N.D. +0.5 +0.6 +0.3 +0.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.8 +1.1 +0.5 -0.1
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