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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_03821 and H281DRAFT_03822 are separated by 94 nucleotides
H281DRAFT_03822 and H281DRAFT_03823 are separated by 110 nucleotides
H281DRAFT_03823 and H281DRAFT_03824 are separated by 362 nucleotides
H281DRAFT_03824 and H281DRAFT_03825 are separated by 150 nucleotides
H281DRAFT_03821: H281DRAFT_03821 - serine/threonine protein kinase, at 346,420 to 347,799
_03821
H281DRAFT_03822: H281DRAFT_03822 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 347,894 to 348,856
_03822
H281DRAFT_03823: H281DRAFT_03823 - methyl-accepting chemotaxis protein-1, serine sensor receptor, at 348,967 to 350,721
_03823
H281DRAFT_03824: H281DRAFT_03824 - zinc transporter, at 351,084 to 352,121
_03824
H281DRAFT_03825: H281DRAFT_03825 - diguanylate cyclase (GGDEF) domain-containing protein, at 352,272 to 353,465
_03825
Group
Condition
H281DRAFT
_03821
H281DRAFT
_03822
H281DRAFT
_03823
H281DRAFT
_03824
H281DRAFT
_03825
carbon source
butyrate (C)
+0.3
-3.8
-0.5
+0.7
+0.8
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-0.4
-0.8
+0.1
-0.7
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
-0.0
-0.1
-0.7
-0.2
-0.9
carbon source
2'-Deoxyinosine 10 mM (C)
+0.0
-0.3
-0.0
-0.9
-0.7
phage
Bu1_100
+0.2
+0.1
-0.7
-0.4
-0.4
carbon source
D-Glucose (C)
+0.2
-0.6
-0.4
-0.1
+0.2
carbon source
acetate (C)
-0.1
-0.5
+0.3
-0.6
+0.2
carbon source
adipate (C)
-0.7
-0.8
-0.1
+0.6
+0.7
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.3
+0.3
-0.2
-1.1
+0.3
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
+0.1
-0.6
+0.7
-0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.8
+0.4
-0.3
+0.6
-0.1
carbon source
propionate (C)
-0.0
-0.7
+0.3
+0.5
-0.1
phage
Bu1_100
-0.1
+0.9
-0.9
-0.1
-0.0
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.5
+0.4
-0.4
+0.5
-0.2
carbon source
2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
+0.3
-0.0
+0.5
-0.8
+0.0
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
+0.5
+0.1
-0.6
-0.3
+0.3
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
+0.3
+0.5
-0.7
+0.3
-0.3
supernatant
LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
+0.5
-0.7
+0.1
+0.5
+0.1
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.1
+0.7
-0.3
-0.3
+0.3
ecofab
LB in EcoFAB_3.5mL
+0.1
+0.9
+0.2
-0.5
-0.1
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days
+0.6
-0.2
+0.2
+0.4
-0.4
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.6
+0.6
+0.1
-0.3
-0.3
carbon source
propionate (C)
+0.3
+0.3
-0.3
+0.6
-0.1
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.4
+0.0
+0.5
-0.3
+0.4
carbon source
Malonic (C)
+0.4
+0.1
+0.4
+0.6
-0.2
carbon source
Hydroxy-L-Proline (C)
+0.7
+0.9
+0.2
+0.3
-0.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.3
+0.9
+0.2
+0.3
-0.0
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.8
+0.6
+0.4
-0.3
+0.3
carbon source
Phenylacetic (C)
+0.5
+0.9
-0.1
+0.4
+0.2
phage
Bu1_10
+0.6
+1.4
+0.3
-0.1
-0.1
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