Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03821 and H281DRAFT_03822 are separated by 94 nucleotidesH281DRAFT_03822 and H281DRAFT_03823 are separated by 110 nucleotidesH281DRAFT_03823 and H281DRAFT_03824 are separated by 362 nucleotidesH281DRAFT_03824 and H281DRAFT_03825 are separated by 150 nucleotides H281DRAFT_03821: H281DRAFT_03821 - serine/threonine protein kinase, at 346,420 to 347,799 _03821 H281DRAFT_03822: H281DRAFT_03822 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 347,894 to 348,856 _03822 H281DRAFT_03823: H281DRAFT_03823 - methyl-accepting chemotaxis protein-1, serine sensor receptor, at 348,967 to 350,721 _03823 H281DRAFT_03824: H281DRAFT_03824 - zinc transporter, at 351,084 to 352,121 _03824 H281DRAFT_03825: H281DRAFT_03825 - diguanylate cyclase (GGDEF) domain-containing protein, at 352,272 to 353,465 _03825
Group Condition H281DRAFT_03821 H281DRAFT_03822 H281DRAFT_03823 H281DRAFT_03824 H281DRAFT_03825
carbon source butyrate (C) +0.3 -3.8 -0.5 +0.7 +0.8
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.4 -0.8 +0.1 -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.0 -0.1 -0.7 -0.2 -0.9
carbon source 2'-Deoxyinosine 10 mM (C) +0.0 -0.3 -0.0 -0.9 -0.7
phage Bu1_100 +0.2 +0.1 -0.7 -0.4 -0.4
carbon source D-Glucose (C) +0.2 -0.6 -0.4 -0.1 +0.2
carbon source acetate (C) -0.1 -0.5 +0.3 -0.6 +0.2
carbon source adipate (C) -0.7 -0.8 -0.1 +0.6 +0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.3 -0.2 -1.1 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.1 -0.6 +0.7 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 +0.4 -0.3 +0.6 -0.1
carbon source propionate (C) -0.0 -0.7 +0.3 +0.5 -0.1
phage Bu1_100 -0.1 +0.9 -0.9 -0.1 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 +0.4 -0.4 +0.5 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 -0.0 +0.5 -0.8 +0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.5 +0.1 -0.6 -0.3 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.3 +0.5 -0.7 +0.3 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.5 -0.7 +0.1 +0.5 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 +0.7 -0.3 -0.3 +0.3
ecofab LB in EcoFAB_3.5mL +0.1 +0.9 +0.2 -0.5 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6 -0.2 +0.2 +0.4 -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 +0.6 +0.1 -0.3 -0.3
carbon source propionate (C) +0.3 +0.3 -0.3 +0.6 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +0.0 +0.5 -0.3 +0.4
carbon source Malonic (C) +0.4 +0.1 +0.4 +0.6 -0.2
carbon source Hydroxy-L-Proline (C) +0.7 +0.9 +0.2 +0.3 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 +0.9 +0.2 +0.3 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.8 +0.6 +0.4 -0.3 +0.3
carbon source Phenylacetic (C) +0.5 +0.9 -0.1 +0.4 +0.2
phage Bu1_10 +0.6 +1.4 +0.3 -0.1 -0.1
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