Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03818 and H281DRAFT_03819 are separated by 51 nucleotidesH281DRAFT_03819 and H281DRAFT_03820 are separated by 39 nucleotidesH281DRAFT_03820 and H281DRAFT_03821 are separated by 226 nucleotidesH281DRAFT_03821 and H281DRAFT_03822 are separated by 94 nucleotides H281DRAFT_03818: H281DRAFT_03818 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 342,294 to 343,916 _03818 H281DRAFT_03819: H281DRAFT_03819 - hypothetical protein, at 343,968 to 345,551 _03819 H281DRAFT_03820: H281DRAFT_03820 - methylated-DNA-[protein]-cysteine S-methyltransferase, at 345,591 to 346,193 _03820 H281DRAFT_03821: H281DRAFT_03821 - serine/threonine protein kinase, at 346,420 to 347,799 _03821 H281DRAFT_03822: H281DRAFT_03822 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 347,894 to 348,856 _03822
Group Condition H281DRAFT_03818 H281DRAFT_03819 H281DRAFT_03820 H281DRAFT_03821 H281DRAFT_03822
carbon source butyrate (C) -0.1 -0.2 +0.3 +0.3 -3.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.4 -2.4 -0.0 +0.8
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.1 +0.2 -1.6 +0.5 -0.7
carbon source Azelaic (C) +0.2 -0.0 -2.1 +0.5 -0.3
carbon source Hexanoic (C) -0.1 +0.3 -1.0 -0.1 -0.5
carbon source propionate (C) +0.0 +0.2 -0.6 -0.0 -0.7
carbon source Pimelic (C) +0.2 +0.1 -0.9 -0.2 -0.4
carbon source adipate (C) +0.3 +0.1 +0.4 -0.7 -0.8
carbon source adipate (C) +0.3 +0.1 -1.0 +0.1 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 -0.2 -0.9 -0.2 +0.9
carbon source D-Glucose (C) +0.3 +0.1 +0.4 +0.2 -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 +1.3 +0.3 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.1 +0.8 -0.5 +0.4
carbon source Glycerol (C) -0.3 +0.1 +0.6 +0.5 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 +1.0 +0.3 +0.1
carbon source acetate (C) +0.2 -0.4 +1.2 +0.0 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.1 +1.3 -0.8 +0.4
carbon source 3-Hydroxypropionate (C) +0.3 +0.1 +0.9 -0.2 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.0 +0.2 +1.0 +0.2 -0.1
carbon source p-Coumaric (C) +0.0 +0.1 +1.2 +0.3 +0.0
phage Bu1_100 +0.1 +0.5 +0.3 -0.1 +0.9
carbon source Glycerol (C) +0.3 +0.1 +0.9 -0.1 +0.6
carbon source 2-furoic (C) +0.2 +0.0 +0.7 +0.3 +0.6
ecofab LB in EcoFAB_3.5mL -0.2 +0.0 +1.0 +0.1 +0.9
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 -0.1 +0.7 +0.8 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.2 +0.0 +1.3 +0.3 +0.5
carbon source Hydroxy-L-Proline (C) -0.2 -0.2 +0.9 +0.7 +0.9
carbon source Phenylacetic (C) +0.2 +0.2 +0.2 +0.5 +0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 -0.0 +0.8 +0.3 +0.9
phage Bu1_10 -0.2 +0.3 +0.5 +0.6 +1.4
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