Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_03776 and H281DRAFT_03777 are separated by 262 nucleotidesH281DRAFT_03777 and H281DRAFT_03778 are separated by 161 nucleotidesH281DRAFT_03778 and H281DRAFT_03779 are separated by 257 nucleotidesH281DRAFT_03779 and H281DRAFT_03780 overlap by 23 nucleotides H281DRAFT_03776: H281DRAFT_03776 - protein of unknown function (DUF4399), at 294,532 to 294,963 _03776 H281DRAFT_03777: H281DRAFT_03777 - hypothetical protein, at 295,226 to 295,504 _03777 H281DRAFT_03778: H281DRAFT_03778 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 295,666 to 297,189 _03778 H281DRAFT_03779: H281DRAFT_03779 - Forkhead associated (FHA) domain, binds pSer, pThr, pTyr, at 297,447 to 300,056 _03779 H281DRAFT_03780: H281DRAFT_03780 - HlyD family secretion protein, at 300,034 to 301,407 _03780
Group Condition H281DRAFT_03776 H281DRAFT_03777 H281DRAFT_03778 H281DRAFT_03779 H281DRAFT_03780
phage Bu1_100 N.D. N.D. -1.4 -0.5 +0.0
carbon source adipate (C) N.D. N.D. -1.1 -0.2 -0.4
phage Bu1_100 N.D. N.D. -0.6 -0.8 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. -0.8 +0.2 -0.6
carbon source propionate (C) N.D. N.D. -0.3 -0.5 -0.3
phage Bu1_10 N.D. N.D. -0.5 -0.4 -0.1
carbon source Protocatechuic Acid (C) N.D. N.D. -0.8 -0.3 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.5 +0.3 -0.6
carbon source Dodecandioic (C) N.D. N.D. -0.8 -0.3 +0.3
carbon source succinate (C) N.D. N.D. -0.8 -0.1 +0.2
carbon source Valeric (C) N.D. N.D. -0.6 -0.3 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. -0.8 +0.4 -0.2
carbon source D-Glucose (C) N.D. N.D. +0.2 -0.5 -0.3
carbon source Hexanoic (C) N.D. N.D. +0.3 -0.1 -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.6 +0.3 -0.2
carbon source Malonic (C) N.D. N.D. -0.5 +0.3 -0.2
carbon source Valeric (C) N.D. N.D. -0.8 +0.2 +0.1
carbon source Sebacic (C) N.D. N.D. +0.1 -0.5 +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.6 +0.1 -0.6
carbon source Phenylacetic (C) N.D. N.D. +0.4 -0.5 +0.4
carbon source D-Glucose (C) N.D. N.D. +0.4 -0.3 +0.3
carbon source Hydroxy-L-Proline (C) N.D. N.D. +0.7 -0.1 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. +0.1 +0.6 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. +0.8 +0.2 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. +0.4 +0.4 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. +0.8 +0.1 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. N.D. +0.6 +0.6 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. +0.8 +0.7 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +1.8 +0.5 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +1.8 +0.4 -0.1
remove
H281DRAFT_03776
plot		 remove
H281DRAFT_03777
plot		 remove
H281DRAFT_03778		 remove
H281DRAFT_03779
plot		 remove
H281DRAFT_03780
plot