Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_03751 and H281DRAFT_03752 overlap by 4 nucleotidesH281DRAFT_03752 and H281DRAFT_03753 are separated by 276 nucleotidesH281DRAFT_03753 and H281DRAFT_03754 are separated by 73 nucleotidesH281DRAFT_03754 and H281DRAFT_03755 are separated by 43 nucleotides H281DRAFT_03751: H281DRAFT_03751 - transcriptional regulator, IclR family, at 267,135 to 267,980 _03751 H281DRAFT_03752: H281DRAFT_03752 - transcriptional regulator, IclR family, at 267,977 to 268,834 _03752 H281DRAFT_03753: H281DRAFT_03753 - Glyoxylase, beta-lactamase superfamily II, at 269,111 to 270,070 _03753 H281DRAFT_03754: H281DRAFT_03754 - 3-(3-hydroxy-phenyl)propionate hydroxylase, at 270,144 to 271,862 _03754 H281DRAFT_03755: H281DRAFT_03755 - Protein of unknown function (DUF2783), at 271,906 to 272,142 _03755
Group Condition H281DRAFT_03751 H281DRAFT_03752 H281DRAFT_03753 H281DRAFT_03754 H281DRAFT_03755
carbon source 2-Deoxy-D-Ribose (C) -1.3 -0.7 -0.6 -0.1 N.D.
carbon source acetate (C) -0.7 -0.2 -1.3 -0.3 N.D.
carbon source adipate (C) -0.3 -1.3 -0.0 -0.7 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -1.1 -0.3 -0.3 N.D.
carbon source Gallic Acid (C) -1.0 -0.5 -0.1 -0.4 N.D.
phage Bu1_100 -1.0 -0.8 +0.1 -0.5 N.D.
carbon source propionate (C) -1.5 -0.0 -0.2 -0.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.6 -1.0 -0.5 -0.0 N.D.
carbon source propionate (C) -1.1 -0.9 +0.3 -0.3 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.1 -0.5 +0.0 -0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.8 -0.4 -0.6 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -1.0 -0.8 -0.1 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -0.5 -0.2 +0.1 N.D.
carbon source adipate (C) -0.9 -0.5 -0.3 +0.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.6 -0.9 +0.2 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -0.6 -0.3 +0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.9 -0.4 +0.6 N.D.
carbon source Glycerol (C) -0.9 +0.3 -0.5 -0.2 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) -1.2 -0.3 +0.4 +0.0 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 -1.4 -0.2 +0.2 N.D.
carbon source Hexanoic (C) +0.5 -0.6 -0.8 -0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -0.9 -0.2 +0.6 N.D.
phage Bu1_100 -1.0 +0.7 -0.4 +0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -0.2 +0.3 +0.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 +0.1 +0.5 +0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM +0.6 -0.4 +0.5 +0.5 N.D.
carbon source Suberic (C) +1.3 +0.9 -0.5 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 +1.3 +0.7 +0.4 N.D.
carbon source Pimelic (C) +1.1 +1.1 +0.2 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.6 +0.5 +0.5 N.D.
remove
H281DRAFT_03751
plot		 remove
H281DRAFT_03752
plot		 remove
H281DRAFT_03753		 remove
H281DRAFT_03754
plot		 remove
H281DRAFT_03755
plot