Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03635 and H281DRAFT_03636 are separated by 49 nucleotidesH281DRAFT_03636 and H281DRAFT_03637 overlap by 8 nucleotidesH281DRAFT_03637 and H281DRAFT_03638 are separated by 26 nucleotidesH281DRAFT_03638 and H281DRAFT_03639 are separated by 32 nucleotides H281DRAFT_03635: H281DRAFT_03635 - hypothetical protein, at 144,519 to 144,830 _03635 H281DRAFT_03636: H281DRAFT_03636 - Phenylpropionate dioxygenase, large terminal subunit, at 144,880 to 145,983 _03636 H281DRAFT_03637: H281DRAFT_03637 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 145,976 to 146,743 _03637 H281DRAFT_03638: H281DRAFT_03638 - Cupin domain-containing protein, at 146,770 to 147,297 _03638 H281DRAFT_03639: H281DRAFT_03639 - Pimeloyl-ACP methyl ester carboxylesterase, at 147,330 to 148,223 _03639
Group Condition H281DRAFT_03635 H281DRAFT_03636 H281DRAFT_03637 H281DRAFT_03638 H281DRAFT_03639
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.5 -1.0 -1.0 N.D.
carbon source Protocatechuic Acid (C) N.D. -1.7 -1.1 +0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -0.1 -1.1 -1.0 N.D.
carbon source succinate (C) N.D. -0.7 -0.7 -0.4 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.2 -1.0 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.3 -1.3 +0.1 N.D.
carbon source D-Glucose 20 mM (C) N.D. -0.0 -0.6 -0.8 N.D.
carbon source D-Glucose (C) N.D. -0.3 -0.6 -0.5 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.8 -0.3 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 -0.3 -0.9 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -0.9 -0.3 -0.1 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.4 -0.5 -0.4 N.D.
carbon source D-Glucose 20 mM (C) N.D. -0.3 -0.5 -0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.0 -0.6 -0.5 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.6 -0.2 -0.5 N.D.
carbon source Protocatechuic Acid (C) N.D. -0.5 -0.3 -0.4 N.D.
carbon source D-Glucose (C) N.D. -0.5 -0.8 +0.1 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -0.2 -0.7 -0.2 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.4 +0.1 -0.6 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -1.1 +0.0 N.D.
ecofab LB in EcoFAB_3.5mL N.D. +0.2 -0.4 -0.7 N.D.
phage Bu1_100 N.D. +0.2 +0.5 -1.6 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.3 +0.3 -0.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. +0.4 -0.7 -0.1 N.D.
carbon source 3-Hydroxypropionate (C) N.D. +0.3 -1.0 +0.3 N.D.
carbon source Dodecandioic (C) N.D. -0.8 +0.7 +0.3 N.D.
carbon source Phenylacetic (C) N.D. +0.0 -0.6 +0.9 N.D.
carbon source Hexanoic (C) N.D. -0.6 +1.0 -0.0 N.D.
phage Bu1_100 N.D. -0.3 +0.3 +0.7 N.D.
carbon source Phenylacetic (C) N.D. +0.6 +0.2 +0.6 N.D.
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