Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03523 and H281DRAFT_03524 are separated by 111 nucleotidesH281DRAFT_03524 and H281DRAFT_03525 are separated by 218 nucleotidesH281DRAFT_03525 and H281DRAFT_03526 are separated by 111 nucleotidesH281DRAFT_03526 and H281DRAFT_03527 are separated by 269 nucleotides H281DRAFT_03523: H281DRAFT_03523 - mannose-6-phosphate isomerase, at 22,288 to 23,397 _03523 H281DRAFT_03524: H281DRAFT_03524 - hypothetical protein, at 23,509 to 23,784 _03524 H281DRAFT_03525: H281DRAFT_03525 - cold-shock DNA-binding protein family, at 24,003 to 24,206 _03525 H281DRAFT_03526: H281DRAFT_03526 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 24,318 to 25,940 _03526 H281DRAFT_03527: H281DRAFT_03527 - uncharacterized domain 1-containing protein, at 26,210 to 26,644 _03527
Group Condition H281DRAFT_03523 H281DRAFT_03524 H281DRAFT_03525 H281DRAFT_03526 H281DRAFT_03527
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -1.3 -2.8 -0.3 -0.2
carbon source Phenylacetic (C) -0.1 -1.3 -1.6 -0.6 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.4 -0.7 -1.9 -0.3 -0.5
carbon source Hydroxy-L-Proline (C) -0.4 -0.6 -1.7 -0.1 -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 -0.4 -1.5 -0.3 -0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 -0.6 -1.0 -0.6 -0.3
carbon source p-Coumaric (C) -0.1 -0.8 -1.4 -0.2 -0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 -0.8 -1.0 -0.3 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.8 -1.2 -0.4 -0.3
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -0.6 -0.9 -0.3 -0.1
carbon source Phenylacetic (C) +0.2 -1.0 -1.1 -0.4 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 -0.5 -2.0 -0.2 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.6 -1.2 -0.4 -0.0
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -0.8 -0.6 -0.2 -0.1
carbon source Azelaic (C) -0.1 -0.9 -1.5 +0.2 +0.2
carbon source D-Glucose (C) -0.3 -0.4 -1.0 -0.0 -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.2 -0.8 -0.2 -0.5 -0.2
carbon source 4-Methyl-2-oxopentanoic (C) -0.1 -0.3 -1.1 -0.1 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.4 -0.6 -0.8 -0.5 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.3 -0.4 -0.5 -0.1 -0.5
carbon source D-Glucose 20 mM (C) -0.3 -0.8 -0.6 +0.1 -0.0
phage Bu1_100 -0.6 -0.3 +0.3 -0.3 -0.6
phage Bu1_10 +0.4 -0.5 -0.6 -0.2 -0.2
carbon source Valeric (C) -0.4 -0.0 -0.5 -0.4 +0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.6 -0.8 -0.6 -0.1 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.1 +0.9 +0.5 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +0.0 +0.3 +0.2 +0.3
carbon source L-Glutamic (C) +0.2 +0.3 +0.9 +0.1 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +1.4 +1.8 +0.3 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +1.1 +1.8 +0.6 +0.2
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