Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03509 and H281DRAFT_03510 are separated by 33 nucleotidesH281DRAFT_03510 and H281DRAFT_03511 are separated by 254 nucleotidesH281DRAFT_03511 and H281DRAFT_03512 are separated by 295 nucleotidesH281DRAFT_03512 and H281DRAFT_03513 are separated by 153 nucleotides H281DRAFT_03509: H281DRAFT_03509 - transcriptional regulator, GntR family, at 2,548 to 4,095 _03509 H281DRAFT_03510: H281DRAFT_03510 - Uncharacterized protein involved in outer membrane biogenesis, at 4,129 to 7,905 _03510 H281DRAFT_03511: H281DRAFT_03511 - Uncharacterized conserved protein, at 8,160 to 9,581 _03511 H281DRAFT_03512: H281DRAFT_03512 - Cu+-exporting ATPase, at 9,877 to 12,234 _03512 H281DRAFT_03513: H281DRAFT_03513 - methyl-accepting chemotaxis sensory transducer, at 12,388 to 14,361 _03513
Group Condition H281DRAFT_03509 H281DRAFT_03510 H281DRAFT_03511 H281DRAFT_03512 H281DRAFT_03513
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.3 -0.0 -0.8 -0.3 -0.3
carbon source D-Glucose (C) +0.0 +0.0 -1.0 -0.4 -0.2
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.1 -0.2 -1.0 -0.2 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.0 -1.0 -0.3 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.0 +0.0 -1.1 -0.3 +0.1
phage Bu1_100 -0.1 -0.2 -1.1 +0.1 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.0 -0.5 -0.8 +0.0
carbon source 2-furoic (C) -0.1 +0.1 -0.1 -1.0 -0.0
carbon source 2'-Deoxyinosine 5 mM (C) +0.0 +0.2 -1.0 -0.3 +0.1
carbon source Malonic (C) -0.1 +0.1 -0.6 -0.1 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 +0.1 -1.1 +0.3 -0.0
carbon source D,L-Lactate (C) +0.0 +0.2 -0.3 -0.7 +0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 +0.0 -1.0 +0.1 +0.1
carbon source Malonic (C) +0.1 -0.1 -0.9 +0.1 +0.1
carbon source 4-Methyl-2-oxopentanoic (C) +0.0 -0.1 -0.3 -0.6 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.0 +0.1 -0.7 -0.3 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 +0.0 -0.9 +0.2 -0.0
carbon source D-Glucose (C) +0.1 -0.0 -0.8 +0.0 +0.2
carbon source D-Glucose 20 mM (C) -0.0 +0.0 -0.8 +0.3 +0.1
carbon source 3-Hydroxypropionate (C) -0.1 -0.1 +0.4 -0.5 -0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 +0.2 -0.7 -0.2 +0.3
carbon source D-Glucose 20 mM (C) -0.1 +0.0 -0.7 +0.3 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 +0.2 -0.7 +0.4 -0.0
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.2 -0.3 -0.4 +0.4
phage Bu1_100 -0.3 +0.0 -0.4 +0.5 +0.2
carbon source adipate (C) -0.0 -0.1 +0.6 -0.1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.2 -0.0 -0.4 +0.6
phage Bu1_10 +0.1 +0.6 -0.5 +0.2 +0.1
carbon source adipate (C) -0.1 -0.2 +0.4 +0.3 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.1 +0.1 -0.4 +0.9
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