Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03469 and H281DRAFT_03470 are separated by 308 nucleotidesH281DRAFT_03470 and H281DRAFT_03471 overlap by 4 nucleotidesH281DRAFT_03471 and H281DRAFT_03472 are separated by 349 nucleotidesH281DRAFT_03472 and H281DRAFT_03473 are separated by 154 nucleotides H281DRAFT_03469: H281DRAFT_03469 - hypothetical protein, at 552,123 to 552,632 _03469 H281DRAFT_03470: H281DRAFT_03470 - kumamolisin. Serine peptidase. MEROPS family S53, at 552,941 to 554,560 _03470 H281DRAFT_03471: H281DRAFT_03471 - Carboxypeptidase C (cathepsin A), at 554,557 to 556,212 _03471 H281DRAFT_03472: H281DRAFT_03472 - hypothetical protein, at 556,562 to 557,014 _03472 H281DRAFT_03473: H281DRAFT_03473 - hypothetical protein, at 557,169 to 557,528 _03473
Group Condition H281DRAFT_03469 H281DRAFT_03470 H281DRAFT_03471 H281DRAFT_03472 H281DRAFT_03473
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.1 -0.1 N.D. -0.6
carbon source Phenylacetic (C) -0.4 -0.2 -0.4 N.D. +0.0
carbon source D-Glucose (C) -0.3 -0.2 -0.1 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.0 -0.4 +0.1 N.D. -0.4
phage Bu1_10 -0.4 +0.2 -0.3 N.D. -0.2
carbon source Phenylacetic (C) -0.4 -0.3 -0.3 N.D. +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.8 -0.2 -0.3 N.D. +0.9
carbon source 2'-Deoxyinosine 10 mM (C) -0.5 -0.2 +0.1 N.D. +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 -0.2 +0.3 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -0.1 -0.1 N.D. +0.3
carbon source 2'-Deoxyinosine 5 mM (C) -0.3 -0.2 -0.1 N.D. +0.5
phage Bu1_100 -0.4 -0.4 -0.1 N.D. +0.8
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -0.1 +0.1 N.D. +0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 -0.2 +0.1 N.D. +0.5
phage Bu1_100 -0.5 -0.1 -0.4 N.D. +1.3
carbon source Hexanoic (C) -0.3 -0.1 +0.2 N.D. +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.0 -0.2 +0.1 N.D. +0.6
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.2 +0.0 N.D. +0.5
carbon source D-Galactose (C) -0.1 +0.2 -0.1 N.D. +0.5
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.2 +0.1 N.D. +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.4 -0.2 N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.0 -0.1 N.D. +0.7
carbon source propionate (C) +0.2 +0.4 -0.2 N.D. +0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.1 -0.2 +0.2 N.D. +0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 -0.2 -0.1 N.D. +0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 +0.4 +0.3 N.D. +0.2
ecofab LB in EcoFAB_3.5mL +0.2 +0.1 +0.4 N.D. +0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.1 +0.0 +0.1 N.D. +0.7
carbon source D-Glucose (C) +0.1 +0.4 +0.4 N.D. +0.7
carbon source Malonic (C) +0.5 +0.2 +0.3 N.D. +0.7
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