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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_03465 and H281DRAFT_03466 are separated by 67 nucleotides
H281DRAFT_03466 and H281DRAFT_03467 are separated by 155 nucleotides
H281DRAFT_03467 and H281DRAFT_03468 are separated by 363 nucleotides
H281DRAFT_03468 and H281DRAFT_03469 are separated by 82 nucleotides
H281DRAFT_03465: H281DRAFT_03465 - hypothetical protein, at 549,749 to 550,000
_03465
H281DRAFT_03466: H281DRAFT_03466 - transcriptional regulator, AsnC family, at 550,068 to 550,535
_03466
H281DRAFT_03467: H281DRAFT_03467 - Threonine/homoserine/homoserine lactone efflux protein, at 550,691 to 551,356
_03467
H281DRAFT_03468: H281DRAFT_03468 - small multidrug resistance family-3 protein, at 551,720 to 552,040
_03468
H281DRAFT_03469: H281DRAFT_03469 - hypothetical protein, at 552,123 to 552,632
_03469
Group
Condition
H281DRAFT
_03465
H281DRAFT
_03466
H281DRAFT
_03467
H281DRAFT
_03468
H281DRAFT
_03469
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
-0.1
-0.6
-0.2
-0.2
carbon source
2-Deoxy-D-Ribose (C)
N.D.
-0.2
-0.3
-0.2
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
-0.2
-0.4
+0.4
-0.8
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.3
-0.4
-0.2
-0.1
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
N.D.
-0.1
-0.2
-0.3
-0.3
carbon source
D-Glucose (C)
N.D.
-0.2
+0.0
-0.4
-0.3
carbon source
Sebacic (C)
N.D.
-0.3
-0.1
-0.3
-0.0
carbon source
2-Deoxy-D-Ribose 10 mM (C)
N.D.
-0.4
-0.0
+0.1
-0.4
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
-0.3
-0.3
+0.0
-0.2
carbon source
2'-Deoxyinosine 10 mM (C)
N.D.
-0.6
+0.1
+0.3
-0.5
carbon source
Phenylacetic (C)
N.D.
+0.0
-0.4
+0.2
-0.4
carbon source
D,L-Lactate (C)
N.D.
-0.3
-0.2
-0.1
+0.2
phage
Bu1_10
N.D.
-0.3
+0.3
-0.0
-0.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
N.D.
+0.2
-0.5
-0.2
+0.1
carbon source
2'-Deoxyinosine 10 mM (C)
N.D.
-0.4
-0.0
+0.2
-0.2
carbon source
acetate (C)
N.D.
-0.2
+0.3
-0.2
-0.2
carbon source
2'-Deoxyinosine 5 mM (C)
N.D.
-0.3
+0.3
+0.1
-0.3
carbon source
3-Hydroxypropionate (C)
N.D.
+0.2
-0.5
-0.1
+0.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
N.D.
-0.4
+0.4
+0.0
-0.2
carbon source
2-Deoxy-D-Ribose 20 mM (C)
N.D.
-0.4
+0.4
-0.0
-0.2
carbon source
adipate (C)
N.D.
+0.3
-0.3
-0.1
+0.0
phage
Bu1_100
N.D.
+0.6
-0.0
+0.1
-0.5
carbon source
D-Galactose (C)
N.D.
+0.2
-0.3
+0.3
-0.1
carbon source
propionate (C)
N.D.
-0.1
-0.1
+0.3
+0.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
N.D.
-0.2
+0.4
+0.3
-0.1
carbon source
D-Glucose 20 mM (C)
N.D.
-0.2
+0.4
+0.2
-0.0
carbon source
butyrate (C)
N.D.
+0.2
+0.4
-0.0
-0.1
carbon source
Hexanoic (C)
N.D.
+0.4
+0.5
-0.1
-0.3
carbon source
Malonic (C)
N.D.
+0.0
+0.0
+0.3
+0.5
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
N.D.
+0.2
+0.6
+0.2
+0.2
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