Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03462 and H281DRAFT_03463 are separated by 202 nucleotidesH281DRAFT_03463 and H281DRAFT_03464 are separated by 87 nucleotidesH281DRAFT_03464 and H281DRAFT_03465 are separated by 108 nucleotidesH281DRAFT_03465 and H281DRAFT_03466 are separated by 67 nucleotides H281DRAFT_03462: H281DRAFT_03462 - membrane protein DedA, SNARE-associated domain, at 546,520 to 548,523 _03462 H281DRAFT_03463: H281DRAFT_03463 - hypothetical protein, at 548,726 to 549,076 _03463 H281DRAFT_03464: H281DRAFT_03464 - Organic hydroperoxide reductase OsmC/OhrA, at 549,164 to 549,640 _03464 H281DRAFT_03465: H281DRAFT_03465 - hypothetical protein, at 549,749 to 550,000 _03465 H281DRAFT_03466: H281DRAFT_03466 - transcriptional regulator, AsnC family, at 550,068 to 550,535 _03466
Group Condition H281DRAFT_03462 H281DRAFT_03463 H281DRAFT_03464 H281DRAFT_03465 H281DRAFT_03466
carbon source 2-furoic (C) -0.7 N.D. -0.2 N.D. +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 N.D. +0.0 N.D. -0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.3 N.D. +0.0 N.D. -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 N.D. +0.0 N.D. -0.3
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 N.D. -0.2 N.D. -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 N.D. -0.2 N.D. -0.2
lb LB +0.2 N.D. -0.3 N.D. -0.2
carbon source Gallic Acid (C) -0.3 N.D. -0.2 N.D. +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 N.D. -0.1 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 N.D. -0.0 N.D. +0.3
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 N.D. +0.1 N.D. -0.6
carbon source Dodecandioic (C) +0.3 N.D. -0.3 N.D. -0.2
carbon source acetate (C) +0.3 N.D. -0.3 N.D. -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.2 N.D. +0.1 N.D. -0.4
carbon source Sebacic (C) +0.3 N.D. +0.1 N.D. -0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 N.D. +0.2 N.D. -0.2
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 N.D. +0.2 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 N.D. +0.2 N.D. -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.4 N.D. +0.1 N.D. -0.1
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 N.D. +0.3 N.D. -0.4
control NoPhageControl +0.4 N.D. +0.2 N.D. -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 N.D. -0.1 N.D. +0.1
ecofab LB in EcoFAB_3.5mL +0.6 N.D. -0.0 N.D. -0.1
phage Bu1_100 -0.0 N.D. +0.0 N.D. +0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 N.D. +0.4 N.D. +0.2
carbon source D-Glucose (C) +0.4 N.D. +0.3 N.D. -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 N.D. +0.4 N.D. -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.5 N.D. +0.1 N.D. +0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 N.D. -0.0 N.D. +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 N.D. +0.3 N.D. +0.1
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