Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03455 and H281DRAFT_03456 are separated by 121 nucleotidesH281DRAFT_03456 and H281DRAFT_03457 are separated by 55 nucleotidesH281DRAFT_03457 and H281DRAFT_03458 are separated by 84 nucleotidesH281DRAFT_03458 and H281DRAFT_03459 are separated by 258 nucleotides H281DRAFT_03455: H281DRAFT_03455 - 2-haloacid dehalogenase, at 536,887 to 537,591 _03455 H281DRAFT_03456: H281DRAFT_03456 - transcriptional regulator, LysR family, at 537,713 to 538,564 _03456 H281DRAFT_03457: H281DRAFT_03457 - putative flavoprotein involved in K+ transport, at 538,620 to 540,422 _03457 H281DRAFT_03458: H281DRAFT_03458 - Transcriptional activator of acetoin/glycerol metabolism, at 540,507 to 541,679 _03458 H281DRAFT_03459: H281DRAFT_03459 - methyl-accepting chemotaxis protein, at 541,938 to 543,701 _03459
Group Condition H281DRAFT_03455 H281DRAFT_03456 H281DRAFT_03457 H281DRAFT_03458 H281DRAFT_03459
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.4 -0.3 -0.1 N.D.
phage Bu1_10 N.D. -0.9 +0.2 -0.7 N.D.
carbon source acetate (C) N.D. -0.8 -0.1 -0.2 N.D.
carbon source D,L-Lactate (C) N.D. -0.8 -0.3 +0.2 N.D.
carbon source D-Glucose (C) N.D. -1.0 -0.1 +0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.7 -0.1 +0.1 N.D.
carbon source 2-furoic (C) N.D. -0.3 +0.2 -0.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.4 -0.4 +0.2 N.D.
carbon source adipate (C) N.D. -0.4 -0.4 +0.2 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.0 -0.7 +0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -0.5 -0.1 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 -0.4 +0.3 N.D.
carbon source Hexanoic (C) N.D. -0.2 +0.3 -0.4 N.D.
carbon source Phenylacetic (C) N.D. +0.4 -0.2 -0.5 N.D.
carbon source Protocatechuic Acid (C) N.D. +0.4 -0.4 -0.2 N.D.
carbon source D-Glucose 20 mM (C) N.D. +0.4 -0.2 -0.3 N.D.
carbon source 3-Hydroxypropionate (C) N.D. +0.4 -0.2 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.5 -0.0 +0.5 N.D.
phage Bu1_100 N.D. +0.5 -0.6 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.4 +0.1 +0.4 N.D.
carbon source butyrate (C) N.D. +0.4 -0.3 +0.3 N.D.
carbon source 3-hydroxybutyric (C) N.D. +0.6 +0.1 -0.2 N.D.
carbon source Hydroxy-L-Proline (C) N.D. +0.9 -0.1 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.5 +0.5 -0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.2 +0.6 -0.1 N.D.
carbon source Valeric (C) N.D. +0.8 +0.3 -0.3 N.D.
phage Bu1_100 N.D. +0.8 -0.2 +0.4 N.D.
carbon source Valeric (C) N.D. +0.6 +0.2 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +1.0 +0.5 -0.3 N.D.
carbon source Hexanoic (C) N.D. +1.1 +0.2 +0.4 N.D.
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