Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03422 and H281DRAFT_03423 are separated by 18 nucleotidesH281DRAFT_03423 and H281DRAFT_03424 are separated by 88 nucleotidesH281DRAFT_03424 and H281DRAFT_03425 are separated by 132 nucleotidesH281DRAFT_03425 and H281DRAFT_03426 are separated by 349 nucleotides H281DRAFT_03422: H281DRAFT_03422 - dihydroxyacid dehydratase (EC 4.2.1.9), at 495,717 to 497,495 _03422 H281DRAFT_03423: H281DRAFT_03423 - Regulator of RNase E activity RraA, at 497,514 to 498,248 _03423 H281DRAFT_03424: H281DRAFT_03424 - Sugar phosphate permease, at 498,337 to 499,665 _03424 H281DRAFT_03425: H281DRAFT_03425 - transcriptional regulator, LacI family, at 499,798 to 500,865 _03425 H281DRAFT_03426: H281DRAFT_03426 - cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-), at 501,215 to 502,108 _03426
Group Condition H281DRAFT_03422 H281DRAFT_03423 H281DRAFT_03424 H281DRAFT_03425 H281DRAFT_03426
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.4 N.D. +0.1 N.D. -0.5
carbon source 2-furoic (C) -0.3 N.D. -0.0 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. -0.2 N.D. -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.7 N.D. +0.3 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. +0.1 N.D. -1.0
carbon source D-Glucose (C) +0.3 N.D. -0.2 N.D. -0.5
carbon source Protocatechuic Acid (C) -0.1 N.D. +0.3 N.D. -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 N.D. -0.3 N.D. +0.3
carbon source butyrate (C) -0.4 N.D. +0.4 N.D. -0.1
carbon source succinate (C) -0.5 N.D. +0.0 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. -0.1 N.D. -0.7
carbon source Gallic Acid (C) -0.4 N.D. -0.2 N.D. +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. -0.6 N.D. +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 N.D. +0.3 N.D. -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.5 N.D. -0.1 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. -0.1 N.D. -0.4
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 N.D. +0.2 N.D. -0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 N.D. +0.0 N.D. +0.5
carbon source Valeric (C) +0.5 N.D. +0.1 N.D. -0.3
lb LB +0.3 N.D. -0.2 N.D. +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.4 N.D. -0.1 N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 N.D. +0.3 N.D. -0.1
carbon source D-Glucose 20 mM (C) +0.4 N.D. +0.3 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. -0.3 N.D. +0.6
carbon source Malonic (C) +0.1 N.D. +0.2 N.D. +0.5
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 N.D. +0.1 N.D. +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.4 N.D. +0.1 N.D. +0.4
carbon source Sebacic (C) +0.5 N.D. +0.5 N.D. +0.1
ecofab LB in EcoFAB_3.5mL +0.3 N.D. +0.2 N.D. +0.9
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.4 N.D. +0.2 N.D. +0.7
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